Gene
RNA
| Item | Value |
|---|---|
| gene id | G1879980 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 53801037 ~ 53804872 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2150561 | True | 432 | lncRNA | 0.34 | 3 | 53801037 | 53804872 |
53,797,000
53,798,000
53,799,000
53,800,000
53,801,000
53,802,000
53,803,000
53,804,000
53,805,000
53,806,000
53,807,000
53,808,000
NC_048587.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502970 | LOC106610710 | coding | upstream | 8942 | 53784080 ~ 53792095 (+) |
| tbp | tbp | coding | upstream | 20923 | 53771355 ~ 53780114 (+) |
| LOC110502967 | psmb1 | coding | upstream | 47426 | 53751366 ~ 53753611 (+) |
| LOC110502965 | dll1 | coding | upstream | 143605 | 53651311 ~ 53657432 (+) |
| LOC118943904 | NA | coding | upstream | 400740 | 53398184 ~ 53400297 (+) |
| LOC110502971 | LOC106610715 | coding | downstream | 24419 | 53829291 ~ 53840691 (+) |
| LOC110503035 | urb2 | coding | downstream | 63823 | 53868695 ~ 53893092 (+) |
| LOC110502975 | galt2 | coding | downstream | 97569 | 53902441 ~ 54027929 (+) |
| LOC110502976 | LOC106610750 | coding | downstream | 269484 | 54074356 ~ 54097821 (+) |
| LOC110503037 | LOC106610766 | coding | downstream | 308841 | 54113713 ~ 54190405 (+) |
| G1879977 | NA | non-coding | upstream | 3462 | 53797269 ~ 53797575 (+) |
| G1879969 | NA | non-coding | upstream | 36324 | 53764401 ~ 53764713 (+) |
| G1879968 | NA | non-coding | upstream | 37382 | 53763454 ~ 53763655 (+) |
| G1879956 | NA | non-coding | upstream | 44795 | 53756002 ~ 53756242 (+) |
| G1879945 | NA | non-coding | upstream | 56453 | 53744143 ~ 53744584 (+) |
| G1879983 | NA | non-coding | downstream | 4688 | 53809560 ~ 53809896 (+) |
| G1879998 | NA | non-coding | downstream | 20186 | 53825058 ~ 53825364 (+) |
| G1880009 | NA | non-coding | downstream | 37104 | 53841976 ~ 53843302 (+) |
| G1880002 | NA | non-coding | downstream | 39361 | 53844233 ~ 53847002 (+) |
| G1880012 | NA | non-coding | downstream | 52445 | 53857317 ~ 53857729 (+) |
| G1879582 | NA | other | upstream | 422851 | 53377810 ~ 53378186 (+) |
| G1878894 | LOC106610502 | other | upstream | 940402 | 52857868 ~ 52860635 (+) |
| G1878893 | NA | other | upstream | 964403 | 52825488 ~ 52836634 (+) |
| G1878346 | LOC100136012 | other | upstream | 1574848 | 52225820 ~ 52226189 (+) |
| G1879958 | NA | other | downstream | 46799 | 53851671 ~ 53855730 (+) |
| G1881371 | NA | other | downstream | 1197910 | 55002782 ~ 55003672 (+) |
| G1882830 | NA | other | downstream | 2724923 | 56529795 ~ 56538483 (+) |
| G1882831 | NA | other | downstream | 2728745 | 56533617 ~ 56543256 (+) |
| LOC110503001 | LOC106611028 | other | downstream | 2868376 | 56613066 ~ 56727194 (+) |
