Gene
RNA
| Item | Value |
|---|---|
| gene id | G1880506 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 53802248 ~ 53804847 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2151186 | True | 306 | lncRNA | 0.34 | 3 | 53802248 | 53804847 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pdcd2 | pdcd2 | coding | downstream | 18166 | 53779267 ~ 53784082 (-) |
| LOC110502966 | phf10 | coding | downstream | 67628 | 53716988 ~ 53734620 (-) |
| LOC110502964 | LOC106610676 | coding | downstream | 230767 | 53565101 ~ 53571481 (-) |
| LOC110502963 | LOC106610657 | coding | downstream | 240214 | 53517983 ~ 53562034 (-) |
| LOC110502962 | LOC106610650 | coding | downstream | 287656 | 53506093 ~ 53514592 (-) |
| ccsapb | LOC106610728 | coding | upstream | 43780 | 53848627 ~ 53851652 (-) |
| LOC100135949 | actc1 | coding | upstream | 47072 | 53851919 ~ 53855036 (-) |
| LOC110502973 | abcb10 | coding | upstream | 53872 | 53858719 ~ 53864562 (-) |
| LOC110503036 | LOC106610742 | coding | upstream | 234171 | 54039018 ~ 54073953 (-) |
| LOC110503071 | NA | coding | upstream | 408410 | 54213257 ~ 54217097 (-) |
| G1880501 | NA | non-coding | downstream | 6392 | 53795570 ~ 53795856 (-) |
| G1880500 | NA | non-coding | downstream | 6816 | 53795220 ~ 53795432 (-) |
| G1880499 | NA | non-coding | downstream | 8095 | 53793588 ~ 53794153 (-) |
| G1880495 | NA | non-coding | downstream | 10181 | 53790242 ~ 53792067 (-) |
| G1880489 | NA | non-coding | downstream | 31824 | 53770185 ~ 53770424 (-) |
| G1880514 | NA | non-coding | upstream | 9359 | 53814206 ~ 53814426 (-) |
| G1880528 | NA | non-coding | upstream | 34678 | 53839525 ~ 53840896 (-) |
| G1880536 | NA | non-coding | upstream | 39444 | 53844291 ~ 53845770 (-) |
| G1880538 | NA | non-coding | upstream | 41101 | 53845948 ~ 53846930 (-) |
| G1880549 | NA | non-coding | upstream | 75558 | 53880405 ~ 53880688 (-) |
| G1879406 | NA | other | downstream | 637897 | 53163242 ~ 53164351 (-) |
| G1878770 | NA | other | downstream | 1158739 | 52643088 ~ 52643509 (-) |
| LOC110502957 | LOC106610540 | other | downstream | 1486470 | 52271405 ~ 52315778 (-) |
| G1878324 | NA | other | downstream | 1594621 | 52207428 ~ 52207627 (-) |
| G1878101 | NA | other | downstream | 1764498 | 52036596 ~ 52037750 (-) |
| G1880780 | NA | other | upstream | 439935 | 54244782 ~ 54246686 (-) |
| G1881414 | NA | other | upstream | 1197919 | 55002766 ~ 55003624 (-) |
| G1883219 | NA | other | upstream | 2801159 | 56606006 ~ 56610640 (-) |
| G1883244 | NA | other | upstream | 2839160 | 56644007 ~ 56709888 (-) |
