Gene
RNA
| Item | Value |
|---|---|
| gene id | G1880538 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 53845948 ~ 53846930 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2151228 | True | 983 | lncRNA | 0.43 | 1 | 53845948 | 53846930 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pdcd2 | pdcd2 | coding | downstream | 61866 | 53779267 ~ 53784082 (-) |
| LOC110502966 | phf10 | coding | downstream | 111328 | 53716988 ~ 53734620 (-) |
| LOC110502964 | LOC106610676 | coding | downstream | 274467 | 53565101 ~ 53571481 (-) |
| LOC110502963 | LOC106610657 | coding | downstream | 283914 | 53517983 ~ 53562034 (-) |
| LOC110502962 | LOC106610650 | coding | downstream | 331356 | 53506093 ~ 53514592 (-) |
| ccsapb | LOC106610728 | coding | upstream | 1697 | 53848627 ~ 53851652 (-) |
| LOC100135949 | actc1 | coding | upstream | 4989 | 53851919 ~ 53855036 (-) |
| LOC110502973 | abcb10 | coding | upstream | 11789 | 53858719 ~ 53864562 (-) |
| LOC110503036 | LOC106610742 | coding | upstream | 192088 | 54039018 ~ 54073953 (-) |
| LOC110503071 | NA | coding | upstream | 366327 | 54213257 ~ 54217097 (-) |
| G1880536 | NA | non-coding | downstream | 178 | 53844291 ~ 53845770 (-) |
| G1880528 | NA | non-coding | downstream | 5052 | 53839525 ~ 53840896 (-) |
| G1880514 | NA | non-coding | downstream | 31522 | 53814206 ~ 53814426 (-) |
| G1880506 | NA | non-coding | downstream | 41101 | 53802248 ~ 53804847 (-) |
| G1880501 | NA | non-coding | downstream | 50092 | 53795570 ~ 53795856 (-) |
| G1880549 | NA | non-coding | upstream | 33475 | 53880405 ~ 53880688 (-) |
| G1880556 | NA | non-coding | upstream | 41909 | 53888839 ~ 53889186 (-) |
| G1880557 | NA | non-coding | upstream | 44428 | 53891358 ~ 53891626 (-) |
| G1880561 | NA | non-coding | upstream | 52926 | 53899856 ~ 53900116 (-) |
| G1880563 | NA | non-coding | upstream | 55534 | 53902464 ~ 53977108 (-) |
| G1879406 | NA | other | downstream | 681597 | 53163242 ~ 53164351 (-) |
| G1878770 | NA | other | downstream | 1202439 | 52643088 ~ 52643509 (-) |
| LOC110502957 | LOC106610540 | other | downstream | 1530170 | 52271405 ~ 52315778 (-) |
| G1878324 | NA | other | downstream | 1638321 | 52207428 ~ 52207627 (-) |
| G1878101 | NA | other | downstream | 1808198 | 52036596 ~ 52037750 (-) |
| G1880780 | NA | other | upstream | 397852 | 54244782 ~ 54246686 (-) |
| G1881414 | NA | other | upstream | 1155836 | 55002766 ~ 55003624 (-) |
| G1883219 | NA | other | upstream | 2759076 | 56606006 ~ 56610640 (-) |
| G1883244 | NA | other | upstream | 2797077 | 56644007 ~ 56709888 (-) |
