Gene
RNA
| Item | Value |
|---|---|
| gene id | G1880036 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 53893931 ~ 53894373 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2150625 | True | 443 | lncRNA | 0.39 | 1 | 53893931 | 53894373 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503035 | urb2 | coding | upstream | 839 | 53868695 ~ 53893092 (+) |
| LOC110502971 | LOC106610715 | coding | upstream | 53240 | 53829291 ~ 53840691 (+) |
| LOC110502970 | LOC106610710 | coding | upstream | 101836 | 53784080 ~ 53792095 (+) |
| tbp | tbp | coding | upstream | 113817 | 53771355 ~ 53780114 (+) |
| LOC110502967 | psmb1 | coding | upstream | 140320 | 53751366 ~ 53753611 (+) |
| LOC110502975 | galt2 | coding | downstream | 8068 | 53902441 ~ 54027929 (+) |
| LOC110502976 | LOC106610750 | coding | downstream | 179983 | 54074356 ~ 54097821 (+) |
| LOC110503037 | LOC106610766 | coding | downstream | 219340 | 54113713 ~ 54190405 (+) |
| LOC110502979 | LOC106610787 | coding | downstream | 435337 | 54329710 ~ 54362634 (+) |
| LOC110502981 | LOC106610814 | coding | downstream | 534445 | 54428818 ~ 54462406 (+) |
| G1880013 | NA | non-coding | upstream | 35845 | 53857832 ~ 53858086 (+) |
| G1880012 | NA | non-coding | upstream | 36202 | 53857317 ~ 53857729 (+) |
| G1880002 | NA | non-coding | upstream | 46929 | 53844233 ~ 53847002 (+) |
| G1880009 | NA | non-coding | upstream | 50629 | 53841976 ~ 53843302 (+) |
| G1879998 | NA | non-coding | upstream | 68567 | 53825058 ~ 53825364 (+) |
| G1880114 | trmt13 | non-coding | downstream | 140027 | 54034400 ~ 54039397 (+) |
| G1880136 | NA | non-coding | downstream | 207332 | 54101705 ~ 54101984 (+) |
| G1880139 | NA | non-coding | downstream | 210382 | 54104755 ~ 54105015 (+) |
| G1880153 | NA | non-coding | downstream | 228170 | 54122543 ~ 54123327 (+) |
| G1880160 | NA | non-coding | downstream | 233376 | 54127749 ~ 54128045 (+) |
| G1879958 | NA | other | upstream | 38201 | 53851671 ~ 53855730 (+) |
| LOC118943904 | NA | other | upstream | 493644 | 53398184 ~ 53400297 (+) |
| G1879582 | NA | other | upstream | 515745 | 53377810 ~ 53378186 (+) |
| G1878894 | LOC106610502 | other | upstream | 1033296 | 52857868 ~ 52860635 (+) |
| G1878893 | NA | other | upstream | 1057297 | 52825488 ~ 52836634 (+) |
| G1881371 | NA | other | downstream | 1108409 | 55002782 ~ 55003672 (+) |
| G1882830 | NA | other | downstream | 2635422 | 56529795 ~ 56538483 (+) |
| G1882831 | NA | other | downstream | 2639244 | 56533617 ~ 56543256 (+) |
| LOC110503001 | LOC106611028 | other | downstream | 2778875 | 56613066 ~ 56727194 (+) |
| G1883457 | NA | other | downstream | 3117664 | 57012037 ~ 57013218 (+) |
