Gene
RNA
| Item | Value |
|---|---|
| gene id | G1880561 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 53899856 ~ 53900116 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2151264 | True | 261 | lncRNA | 0.38 | 1 | 53899856 | 53900116 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502973 | abcb10 | coding | downstream | 35294 | 53858719 ~ 53864562 (-) |
| LOC100135949 | actc1 | coding | downstream | 44820 | 53851919 ~ 53855036 (-) |
| ccsapb | LOC106610728 | coding | downstream | 48204 | 53848627 ~ 53851652 (-) |
| pdcd2 | pdcd2 | coding | downstream | 115774 | 53779267 ~ 53784082 (-) |
| LOC110502966 | phf10 | coding | downstream | 165236 | 53716988 ~ 53734620 (-) |
| LOC110503036 | LOC106610742 | coding | upstream | 138902 | 54039018 ~ 54073953 (-) |
| LOC110503071 | NA | coding | upstream | 313141 | 54213257 ~ 54217097 (-) |
| LOC110502978 | LOC106610780 | coding | upstream | 352765 | 54252881 ~ 54282773 (-) |
| LOC110502980 | LOC106610792 | coding | upstream | 479301 | 54379417 ~ 54423946 (-) |
| LOC110502982 | LOC106610932 | coding | upstream | 661826 | 54561942 ~ 54563802 (-) |
| G1880557 | NA | non-coding | downstream | 8230 | 53891358 ~ 53891626 (-) |
| G1880556 | NA | non-coding | downstream | 10670 | 53888839 ~ 53889186 (-) |
| G1880549 | NA | non-coding | downstream | 19168 | 53880405 ~ 53880688 (-) |
| G1880538 | NA | non-coding | downstream | 52926 | 53845948 ~ 53846930 (-) |
| G1880536 | NA | non-coding | downstream | 54086 | 53844291 ~ 53845770 (-) |
| G1880563 | NA | non-coding | upstream | 2348 | 53902464 ~ 53977108 (-) |
| G1880651 | NA | non-coding | upstream | 114008 | 54014124 ~ 54014553 (-) |
| G1880628 | NA | non-coding | upstream | 125763 | 54025879 ~ 54027582 (-) |
| G1880704 | NA | non-coding | upstream | 201841 | 54101957 ~ 54102192 (-) |
| G1880715 | NA | non-coding | upstream | 219647 | 54119763 ~ 54119990 (-) |
| G1879406 | NA | other | downstream | 735505 | 53163242 ~ 53164351 (-) |
| G1878770 | NA | other | downstream | 1256347 | 52643088 ~ 52643509 (-) |
| LOC110502957 | LOC106610540 | other | downstream | 1584078 | 52271405 ~ 52315778 (-) |
| G1878324 | NA | other | downstream | 1692229 | 52207428 ~ 52207627 (-) |
| G1878101 | NA | other | downstream | 1862106 | 52036596 ~ 52037750 (-) |
| G1880780 | NA | other | upstream | 344666 | 54244782 ~ 54246686 (-) |
| G1881414 | NA | other | upstream | 1102650 | 55002766 ~ 55003624 (-) |
| G1883219 | NA | other | upstream | 2705890 | 56606006 ~ 56610640 (-) |
| G1883244 | NA | other | upstream | 2743891 | 56644007 ~ 56709888 (-) |
