Gene
RNA
| Item | Value |
|---|---|
| gene id | G1880715 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 54119763 ~ 54119990 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2151462 | True | 228 | lncRNA | 0.45 | 1 | 54119763 | 54119990 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503036 | LOC106610742 | coding | downstream | 45810 | 54039018 ~ 54073953 (-) |
| LOC110502973 | abcb10 | coding | downstream | 255201 | 53858719 ~ 53864562 (-) |
| LOC100135949 | actc1 | coding | downstream | 264727 | 53851919 ~ 53855036 (-) |
| ccsapb | LOC106610728 | coding | downstream | 268111 | 53848627 ~ 53851652 (-) |
| pdcd2 | pdcd2 | coding | downstream | 335681 | 53779267 ~ 53784082 (-) |
| LOC110503071 | NA | coding | upstream | 93267 | 54213257 ~ 54217097 (-) |
| LOC110502978 | LOC106610780 | coding | upstream | 132891 | 54252881 ~ 54282773 (-) |
| LOC110502980 | LOC106610792 | coding | upstream | 259427 | 54379417 ~ 54423946 (-) |
| LOC110502982 | LOC106610932 | coding | upstream | 441952 | 54561942 ~ 54563802 (-) |
| LOC110502984 | perp | coding | upstream | 514889 | 54634879 ~ 54647948 (-) |
| G1880704 | NA | non-coding | downstream | 17571 | 54101957 ~ 54102192 (-) |
| G1880628 | NA | non-coding | downstream | 92181 | 54025879 ~ 54027582 (-) |
| G1880651 | NA | non-coding | downstream | 105210 | 54014124 ~ 54014553 (-) |
| G1880563 | NA | non-coding | downstream | 142655 | 53902464 ~ 53977108 (-) |
| G1880561 | NA | non-coding | downstream | 219647 | 53899856 ~ 53900116 (-) |
| G1880719 | NA | non-coding | upstream | 6848 | 54126838 ~ 54127042 (-) |
| G1880726 | NA | non-coding | upstream | 18703 | 54138693 ~ 54138990 (-) |
| G1880729 | NA | non-coding | upstream | 21140 | 54141130 ~ 54141448 (-) |
| G1880699 | NA | non-coding | upstream | 70452 | 54190442 ~ 54191243 (-) |
| G1880702 | NA | non-coding | upstream | 71369 | 54191359 ~ 54192015 (-) |
| G1879406 | NA | other | downstream | 955412 | 53163242 ~ 53164351 (-) |
| G1878770 | NA | other | downstream | 1476254 | 52643088 ~ 52643509 (-) |
| LOC110502957 | LOC106610540 | other | downstream | 1803985 | 52271405 ~ 52315778 (-) |
| G1878324 | NA | other | downstream | 1912136 | 52207428 ~ 52207627 (-) |
| G1880780 | NA | other | upstream | 124792 | 54244782 ~ 54246686 (-) |
| G1881414 | NA | other | upstream | 882776 | 55002766 ~ 55003624 (-) |
| G1883219 | NA | other | upstream | 2486016 | 56606006 ~ 56610640 (-) |
| G1883244 | NA | other | upstream | 2524017 | 56644007 ~ 56709888 (-) |
| LOC110503007 | LOC106586972 | other | upstream | 2992143 | 57071327 ~ 57116725 (-) |
