Gene
RNA
| Item | Value |
|---|---|
| gene id | G1880726 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 54138693 ~ 54138990 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC105896813 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2151473 | True | 219 | lncRNA | 0.48 | 2 | 54138693 | 54138990 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503036 | LOC106610742 | coding | downstream | 64740 | 54039018 ~ 54073953 (-) |
| LOC110502973 | abcb10 | coding | downstream | 274131 | 53858719 ~ 53864562 (-) |
| LOC100135949 | actc1 | coding | downstream | 283657 | 53851919 ~ 53855036 (-) |
| ccsapb | LOC106610728 | coding | downstream | 287041 | 53848627 ~ 53851652 (-) |
| pdcd2 | pdcd2 | coding | downstream | 354611 | 53779267 ~ 53784082 (-) |
| LOC110503071 | NA | coding | upstream | 74267 | 54213257 ~ 54217097 (-) |
| LOC110502978 | LOC106610780 | coding | upstream | 113891 | 54252881 ~ 54282773 (-) |
| LOC110502980 | LOC106610792 | coding | upstream | 240427 | 54379417 ~ 54423946 (-) |
| LOC110502982 | LOC106610932 | coding | upstream | 422952 | 54561942 ~ 54563802 (-) |
| LOC110502984 | perp | coding | upstream | 495889 | 54634879 ~ 54647948 (-) |
| G1880719 | NA | non-coding | downstream | 11651 | 54126838 ~ 54127042 (-) |
| G1880715 | NA | non-coding | downstream | 18703 | 54119763 ~ 54119990 (-) |
| G1880704 | NA | non-coding | downstream | 36501 | 54101957 ~ 54102192 (-) |
| G1880628 | NA | non-coding | downstream | 111111 | 54025879 ~ 54027582 (-) |
| G1880651 | NA | non-coding | downstream | 124140 | 54014124 ~ 54014553 (-) |
| G1880729 | NA | non-coding | upstream | 2140 | 54141130 ~ 54141448 (-) |
| G1880699 | NA | non-coding | upstream | 51452 | 54190442 ~ 54191243 (-) |
| G1880702 | NA | non-coding | upstream | 52369 | 54191359 ~ 54192015 (-) |
| G1880749 | NA | non-coding | upstream | 54727 | 54193717 ~ 54194136 (-) |
| G1880757 | NA | non-coding | upstream | 65673 | 54204663 ~ 54204905 (-) |
| G1879406 | NA | other | downstream | 974342 | 53163242 ~ 53164351 (-) |
| G1878770 | NA | other | downstream | 1495184 | 52643088 ~ 52643509 (-) |
| LOC110502957 | LOC106610540 | other | downstream | 1822915 | 52271405 ~ 52315778 (-) |
| G1878324 | NA | other | downstream | 1931066 | 52207428 ~ 52207627 (-) |
| G1880780 | NA | other | upstream | 105792 | 54244782 ~ 54246686 (-) |
| G1881414 | NA | other | upstream | 863776 | 55002766 ~ 55003624 (-) |
| G1883219 | NA | other | upstream | 2467016 | 56606006 ~ 56610640 (-) |
| G1883244 | NA | other | upstream | 2505017 | 56644007 ~ 56709888 (-) |
| LOC110503007 | LOC106586972 | other | upstream | 2973143 | 57071327 ~ 57116725 (-) |
