Gene
RNA
| Item | Value |
|---|---|
| gene id | G1880749 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 54193717 ~ 54194136 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2151499 | True | 420 | lncRNA | 0.41 | 1 | 54193717 | 54194136 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503036 | LOC106610742 | coding | downstream | 119764 | 54039018 ~ 54073953 (-) |
| LOC110502973 | abcb10 | coding | downstream | 329155 | 53858719 ~ 53864562 (-) |
| LOC100135949 | actc1 | coding | downstream | 338681 | 53851919 ~ 53855036 (-) |
| ccsapb | LOC106610728 | coding | downstream | 342065 | 53848627 ~ 53851652 (-) |
| pdcd2 | pdcd2 | coding | downstream | 409635 | 53779267 ~ 53784082 (-) |
| LOC110503071 | NA | coding | upstream | 19121 | 54213257 ~ 54217097 (-) |
| LOC110502978 | LOC106610780 | coding | upstream | 58745 | 54252881 ~ 54282773 (-) |
| LOC110502980 | LOC106610792 | coding | upstream | 185281 | 54379417 ~ 54423946 (-) |
| LOC110502982 | LOC106610932 | coding | upstream | 367806 | 54561942 ~ 54563802 (-) |
| LOC110502984 | perp | coding | upstream | 440743 | 54634879 ~ 54647948 (-) |
| G1880702 | NA | non-coding | downstream | 1702 | 54191359 ~ 54192015 (-) |
| G1880699 | NA | non-coding | downstream | 2474 | 54190442 ~ 54191243 (-) |
| G1880729 | NA | non-coding | downstream | 52269 | 54141130 ~ 54141448 (-) |
| G1880726 | NA | non-coding | downstream | 54727 | 54138693 ~ 54138990 (-) |
| G1880719 | NA | non-coding | downstream | 66675 | 54126838 ~ 54127042 (-) |
| G1880757 | NA | non-coding | upstream | 10527 | 54204663 ~ 54204905 (-) |
| G1880763 | NA | non-coding | upstream | 24020 | 54218156 ~ 54218855 (-) |
| G1880772 | NA | non-coding | upstream | 39137 | 54233273 ~ 54233479 (-) |
| G1880773 | NA | non-coding | upstream | 39437 | 54233573 ~ 54233864 (-) |
| G1880780 | NA | non-coding | upstream | 50646 | 54244782 ~ 54246686 (-) |
| G1879406 | NA | other | downstream | 1029366 | 53163242 ~ 53164351 (-) |
| G1878770 | NA | other | downstream | 1550208 | 52643088 ~ 52643509 (-) |
| LOC110502957 | LOC106610540 | other | downstream | 1877939 | 52271405 ~ 52315778 (-) |
| G1878324 | NA | other | downstream | 1986090 | 52207428 ~ 52207627 (-) |
| G1881414 | NA | other | upstream | 808630 | 55002766 ~ 55003624 (-) |
| G1883219 | NA | other | upstream | 2411870 | 56606006 ~ 56610640 (-) |
| G1883244 | NA | other | upstream | 2449871 | 56644007 ~ 56709888 (-) |
| LOC110503007 | LOC106586972 | other | upstream | 2917997 | 57071327 ~ 57116725 (-) |
