Gene
RNA
| Item | Value |
|---|---|
| gene id | G1880227 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 54368187 ~ 54372614 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2150847 | True | 3852 | lncRNA | 0.38 | 2 | 54368187 | 54372614 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502979 | LOC106610787 | coding | upstream | 5766 | 54329710 ~ 54362634 (+) |
| LOC110503037 | LOC106610766 | coding | upstream | 177782 | 54113713 ~ 54190405 (+) |
| LOC110502976 | LOC106610750 | coding | upstream | 270366 | 54074356 ~ 54097821 (+) |
| LOC110502975 | galt2 | coding | upstream | 340258 | 53902441 ~ 54027929 (+) |
| LOC110503035 | urb2 | coding | upstream | 475095 | 53868695 ~ 53893092 (+) |
| LOC110502981 | LOC106610814 | coding | downstream | 56204 | 54428818 ~ 54462406 (+) |
| si:ch73-52p7.1 | NA | coding | downstream | 98981 | 54471595 ~ 54472979 (+) |
| LOC110502983 | LOC106610821 | coding | downstream | 220747 | 54593361 ~ 54610361 (+) |
| LOC110502989 | LOC106610853 | coding | downstream | 322261 | 54694875 ~ 54728124 (+) |
| LOC118943891 | NA | coding | downstream | 577920 | 54950534 ~ 54962738 (+) |
| G1880233 | LOC106610780 | non-coding | upstream | 113191 | 54250494 ~ 54254996 (+) |
| G1880231 | NA | non-coding | upstream | 119088 | 54248831 ~ 54249099 (+) |
| G1880219 | NA | non-coding | upstream | 137982 | 54229890 ~ 54230205 (+) |
| G1880215 | NA | non-coding | upstream | 141907 | 54226070 ~ 54226280 (+) |
| G1880305 | NA | non-coding | downstream | 13488 | 54386102 ~ 54400358 (+) |
| G1880332 | NA | non-coding | downstream | 74529 | 54447143 ~ 54448615 (+) |
| G1880338 | NA | non-coding | downstream | 96011 | 54468625 ~ 54468850 (+) |
| G1880355 | NA | non-coding | downstream | 150336 | 54522950 ~ 54523556 (+) |
| G1880358 | NA | non-coding | downstream | 153754 | 54526368 ~ 54526784 (+) |
| G1879958 | NA | other | upstream | 512457 | 53851671 ~ 53855730 (+) |
| LOC118943904 | NA | other | upstream | 967900 | 53398184 ~ 53400297 (+) |
| G1879582 | NA | other | upstream | 990001 | 53377810 ~ 53378186 (+) |
| G1878894 | LOC106610502 | other | upstream | 1507552 | 52857868 ~ 52860635 (+) |
| G1878893 | NA | other | upstream | 1531553 | 52825488 ~ 52836634 (+) |
| G1881371 | NA | other | downstream | 630168 | 55002782 ~ 55003672 (+) |
| G1882830 | NA | other | downstream | 2157181 | 56529795 ~ 56538483 (+) |
| G1882831 | NA | other | downstream | 2161003 | 56533617 ~ 56543256 (+) |
| LOC110503001 | LOC106611028 | other | downstream | 2300634 | 56613066 ~ 56727194 (+) |
| G1883457 | NA | other | downstream | 2639423 | 57012037 ~ 57013218 (+) |
