G1880897


Basic Information

Item Value
gene id G1880897
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 54467940 ~ 54468448 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2151682
ggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttattgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaaaactttcgcaaggcactgtatgtggttgttttacctaccttagttgatatatatgtggttgttttacctaccttagttggttgatatgtggttgttttacCTACCTTAGTTGACTGATATGCGGTTGTTTTACCTACCTTAGTTGACTGATATGCGTTTgttttatctaccttagttgactgatatgtggttgttttacctaccttagttgatatatatgtggttgttttacctaccttagttgatatatatgtggttgttttacctaccttagttgatatatgtggttgttttacctaccttagttgatatat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2151682 True 509 lncRNA 0.34 1 54467940 54468448

Neighbor

gene id symbol gene type direction distance location
LOC110502980 LOC106610792 coding downstream 43994 54379417 ~ 54423946 (-)
LOC110502978 LOC106610780 coding downstream 185167 54252881 ~ 54282773 (-)
LOC110503071 NA coding downstream 250843 54213257 ~ 54217097 (-)
LOC110503036 LOC106610742 coding downstream 393987 54039018 ~ 54073953 (-)
LOC110502973 abcb10 coding downstream 603378 53858719 ~ 53864562 (-)
LOC110502982 LOC106610932 coding upstream 93494 54561942 ~ 54563802 (-)
LOC110502984 perp coding upstream 166431 54634879 ~ 54647948 (-)
LOC118943819 NA coding upstream 191809 54660257 ~ 54661760 (-)
LOC110502987 cssa01h1orf101 coding upstream 209117 54677565 ~ 54694342 (-)
LOC110502990 LOC106610860 coding upstream 287731 54756179 ~ 54767665 (-)
G1880896 NA non-coding downstream 446 54466838 ~ 54467494 (-)
G1880855 NA non-coding downstream 93207 54374504 ~ 54374733 (-)
G1880836 NA non-coding downstream 103541 54358975 ~ 54364399 (-)
G1880781 NA non-coding downstream 219219 54248235 ~ 54248721 (-)
G1880780 NA non-coding downstream 222638 54244782 ~ 54246686 (-)
G1880904 NA non-coding upstream 11283 54479731 ~ 54480021 (-)
G1880906 NA non-coding upstream 13363 54481811 ~ 54482043 (-)
G1880907 NA non-coding upstream 13671 54482119 ~ 54482421 (-)
G1880910 NA non-coding upstream 24084 54492532 ~ 54492786 (-)
G1880912 NA non-coding upstream 26352 54494800 ~ 54495039 (-)
G1879406 NA other downstream 1303589 53163242 ~ 53164351 (-)
G1878770 NA other downstream 1824431 52643088 ~ 52643509 (-)
LOC110502957 LOC106610540 other downstream 2152162 52271405 ~ 52315778 (-)
G1881414 NA other upstream 534318 55002766 ~ 55003624 (-)
G1883219 NA other upstream 2137558 56606006 ~ 56610640 (-)
G1883244 NA other upstream 2175559 56644007 ~ 56709888 (-)
LOC110503007 LOC106586972 other upstream 2643685 57071327 ~ 57116725 (-)
LOC110503041 LOC106579580 other upstream 3121596 57590001 ~ 57616121 (-)

Expression


Co-expression Network