Gene
RNA
| Item | Value |
|---|---|
| gene id | G1880942 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 54551532 ~ 54552979 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2151739 | True | 328 | lncRNA | 0.33 | 2 | 54551532 | 54552979 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502980 | LOC106610792 | coding | downstream | 127586 | 54379417 ~ 54423946 (-) |
| LOC110502978 | LOC106610780 | coding | downstream | 268759 | 54252881 ~ 54282773 (-) |
| LOC110503071 | NA | coding | downstream | 334435 | 54213257 ~ 54217097 (-) |
| LOC110503036 | LOC106610742 | coding | downstream | 477579 | 54039018 ~ 54073953 (-) |
| LOC110502973 | abcb10 | coding | downstream | 686970 | 53858719 ~ 53864562 (-) |
| LOC110502982 | LOC106610932 | coding | upstream | 8963 | 54561942 ~ 54563802 (-) |
| LOC110502984 | perp | coding | upstream | 81900 | 54634879 ~ 54647948 (-) |
| LOC118943819 | NA | coding | upstream | 107278 | 54660257 ~ 54661760 (-) |
| LOC110502987 | cssa01h1orf101 | coding | upstream | 124586 | 54677565 ~ 54694342 (-) |
| LOC110502990 | LOC106610860 | coding | upstream | 203200 | 54756179 ~ 54767665 (-) |
| G1880937 | NA | non-coding | downstream | 7989 | 54542484 ~ 54543543 (-) |
| G1880920 | NA | non-coding | downstream | 33611 | 54516439 ~ 54517921 (-) |
| G1880915 | NA | non-coding | downstream | 50718 | 54500070 ~ 54500814 (-) |
| G1880912 | NA | non-coding | downstream | 56493 | 54494800 ~ 54495039 (-) |
| G1880910 | NA | non-coding | downstream | 58746 | 54492532 ~ 54492786 (-) |
| G1880977 | LOC106610821 | non-coding | upstream | 55015 | 54607994 ~ 54610355 (-) |
| G1881001 | NA | non-coding | upstream | 74465 | 54627444 ~ 54627785 (-) |
| G1881002 | NA | non-coding | upstream | 75080 | 54628059 ~ 54628261 (-) |
| G1881006 | NA | non-coding | upstream | 78376 | 54631355 ~ 54631691 (-) |
| G1881021 | NA | non-coding | upstream | 102234 | 54655213 ~ 54655525 (-) |
| G1880780 | NA | other | downstream | 304846 | 54244782 ~ 54246686 (-) |
| G1879406 | NA | other | downstream | 1387181 | 53163242 ~ 53164351 (-) |
| G1878770 | NA | other | downstream | 1908023 | 52643088 ~ 52643509 (-) |
| LOC110502957 | LOC106610540 | other | downstream | 2235754 | 52271405 ~ 52315778 (-) |
| G1881414 | NA | other | upstream | 449787 | 55002766 ~ 55003624 (-) |
| G1883219 | NA | other | upstream | 2053027 | 56606006 ~ 56610640 (-) |
| G1883244 | NA | other | upstream | 2091028 | 56644007 ~ 56709888 (-) |
| LOC110503007 | LOC106586972 | other | upstream | 2559154 | 57071327 ~ 57116725 (-) |
| LOC110503041 | LOC106579580 | other | upstream | 3037065 | 57590001 ~ 57616121 (-) |
