Gene
RNA
| Item | Value |
|---|---|
| gene id | G1881580 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 55138668 ~ 55139051 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2152492 | True | 384 | lncRNA | 0.59 | 1 | 55138668 | 55139051 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502991 | NA | coding | downstream | 67522 | 55068829 ~ 55071146 (-) |
| LOC110502990 | LOC106610860 | coding | downstream | 371003 | 54756179 ~ 54767665 (-) |
| LOC110502987 | cssa01h1orf101 | coding | downstream | 444326 | 54677565 ~ 54694342 (-) |
| LOC118943819 | NA | coding | downstream | 476908 | 54660257 ~ 54661760 (-) |
| LOC110502984 | perp | coding | downstream | 490720 | 54634879 ~ 54647948 (-) |
| LOC110502996 | LOC107666370 | coding | upstream | 51419 | 55190470 ~ 55204193 (-) |
| LOC110502998 | LOC106610959 | coding | upstream | 842216 | 55981267 ~ 55984852 (-) |
| LOC110503038 | NA | coding | upstream | 905280 | 56044331 ~ 56059595 (-) |
| LOC110503002 | LOC106610976 | coding | upstream | 1621028 | 56760079 ~ 56780244 (-) |
| LOC110503005 | LOC106611007 | coding | upstream | 1717529 | 56856580 ~ 56886643 (-) |
| G1881579 | NA | non-coding | downstream | 1277 | 55137093 ~ 55137391 (-) |
| G1881578 | NA | non-coding | downstream | 2012 | 55136371 ~ 55136656 (-) |
| G1881577 | LOC106610889 | non-coding | downstream | 2635 | 55135577 ~ 55136033 (-) |
| G1881576 | NA | non-coding | downstream | 3353 | 55135079 ~ 55135315 (-) |
| G1881571 | NA | non-coding | downstream | 30049 | 55108260 ~ 55108619 (-) |
| G1881581 | NA | non-coding | upstream | 614 | 55139665 ~ 55139973 (-) |
| G1881583 | LOC106610889 | non-coding | upstream | 3821 | 55142872 ~ 55143317 (-) |
| G1881585 | NA | non-coding | upstream | 6252 | 55145303 ~ 55145566 (-) |
| G1881601 | LOC106610889 | non-coding | upstream | 28531 | 55167582 ~ 55169458 (-) |
| G1881609 | NA | non-coding | upstream | 42042 | 55181093 ~ 55184554 (-) |
| G1881414 | NA | other | downstream | 135044 | 55002766 ~ 55003624 (-) |
| G1880780 | NA | other | downstream | 891982 | 54244782 ~ 54246686 (-) |
| LOC110503036 | LOC106610742 | other | downstream | 1064719 | 54039018 ~ 54073953 (-) |
| G1879406 | NA | other | downstream | 1974317 | 53163242 ~ 53164351 (-) |
| G1878770 | NA | other | downstream | 2495159 | 52643088 ~ 52643509 (-) |
| G1883219 | NA | other | upstream | 1466955 | 56606006 ~ 56610640 (-) |
| G1883244 | NA | other | upstream | 1504956 | 56644007 ~ 56709888 (-) |
| LOC110503007 | LOC106586972 | other | upstream | 1973082 | 57071327 ~ 57116725 (-) |
| LOC110503041 | LOC106579580 | other | upstream | 2450993 | 57590001 ~ 57616121 (-) |
| G1884227 | NA | other | upstream | 2595306 | 57734357 ~ 57735498 (-) |
