G1881975



Basic Information


Item Value
gene id G1881975
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 55584779 ~ 55585116 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2152970
CACACCTTCATCTCATGTTTAAATCCACAAACATTTACCTCAagtttaacctctctgatctccccatcccggatccggtatcgtgaatacagactcaagctcattaccataacgcaatgttaactattcatgaaaatcgcaaatgaaatgaaataaatatgccaccTCTCAAGCTTAGccatttgtaaacaacactgtcatctcagattttcaaaatatgcttctcaaccataggaaaacaatcatttgtgtaaaagtagctagctagcgtagcatttagcgttagcattagcgttagcatccagcacgcaacatttcaacaaaaacataaaatcctt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2152970 True 338 lncRNA 0.37 1 55584779 55585116

Neighbor


gene id symbol gene type direction distance location
LOC110502996 LOC107666370 coding downstream 380586 55190470 ~ 55204193 (-)
LOC110502991 NA coding downstream 513633 55068829 ~ 55071146 (-)
LOC110502990 LOC106610860 coding downstream 817114 54756179 ~ 54767665 (-)
LOC110502987 cssa01h1orf101 coding downstream 890437 54677565 ~ 54694342 (-)
LOC118943819 NA coding downstream 923019 54660257 ~ 54661760 (-)
LOC110502998 LOC106610959 coding upstream 396151 55981267 ~ 55984852 (-)
LOC110503038 NA coding upstream 459215 56044331 ~ 56059595 (-)
LOC110503002 LOC106610976 coding upstream 1174963 56760079 ~ 56780244 (-)
LOC110503005 LOC106611007 coding upstream 1271464 56856580 ~ 56886643 (-)
LOC110503039 LOC106610997 coding upstream 1322364 56907480 ~ 57068071 (-)
G1881920 NA non-coding downstream 5940 55568987 ~ 55578839 (-)
G1881965 NA non-coding downstream 16906 55567639 ~ 55567873 (-)
G1881964 NA non-coding downstream 20513 55563974 ~ 55564266 (-)
G1881947 NA non-coding downstream 54291 55529922 ~ 55530488 (-)
G1881946 NA non-coding downstream 57306 55527071 ~ 55527473 (-)
G1882239 NA non-coding upstream 201074 55786190 ~ 55788085 (-)
G1882289 NA non-coding upstream 283268 55868384 ~ 55868709 (-)
G1882298 NA non-coding upstream 289580 55874696 ~ 55874947 (-)
G1882299 NA non-coding upstream 290230 55875346 ~ 55875570 (-)
G1882301 NA non-coding upstream 291972 55877088 ~ 55877338 (-)
G1881414 NA other downstream 581155 55002766 ~ 55003624 (-)
G1880780 NA other downstream 1338093 54244782 ~ 54246686 (-)
LOC110503036 LOC106610742 other downstream 1510830 54039018 ~ 54073953 (-)
G1879406 NA other downstream 2420428 53163242 ~ 53164351 (-)
G1878770 NA other downstream 2941270 52643088 ~ 52643509 (-)
G1883219 NA other upstream 1020890 56606006 ~ 56610640 (-)
G1883244 NA other upstream 1058891 56644007 ~ 56709888 (-)
LOC110503007 LOC106586972 other upstream 1527017 57071327 ~ 57116725 (-)
LOC110503041 LOC106579580 other upstream 2004928 57590001 ~ 57616121 (-)
G1884227 NA other upstream 2149241 57734357 ~ 57735498 (-)

Expression



Co-expression Network