G1882750


Basic Information

Item Value
gene id G1882750
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 56323685 ~ 56324052 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2153790
ataacatagtagtgtaacataacatagtagtgtaacataaCATAGTAGGGTAACataacatagtagtgtaacataaTTAGAAGTGTAACataacatagtagtgtaacataacatagtagtgtaacataaCATAGTAGGGTAACATAACATAGTAGGGTAACATAATTAGAAGTGTAACATAACATAGTAGGGTAACATAATTAGAAGTGTAACataacatagtagtgtaacataacatagtagtgtaacataacatagtagtgtaacataaCATAGTAGGGTAACATAACATAGTAGGGTAACATAACATAGTAG

Function

NR:

description
LOW QUALITY PROTEIN: AP2-associated protein kinase 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2153790 True 315 lncRNA 0.29 2 56323685 56324052

Neighbor

gene id symbol gene type direction distance location
LOC110502999 NA coding upstream 282331 55985543 ~ 56041354 (+)
LOC110502997 LOC106610965 coding upstream 385100 55935205 ~ 55938585 (+)
dync2li1 dync2li1 coding upstream 1141481 55173043 ~ 55182204 (+)
LOC110502992 LOC106610889 coding upstream 1154146 55071188 ~ 55169539 (+)
LOC118943891 NA coding upstream 1360947 54950534 ~ 54962738 (+)
LOC110503001 LOC106611028 coding downstream 289014 56613066 ~ 56727194 (+)
LOC118943924 NA coding downstream 378679 56701366 ~ 56709966 (+)
LOC110503003 LOC106611055 coding downstream 488352 56812404 ~ 56828732 (+)
LOC110503004 LOC106611018 coding downstream 505004 56829056 ~ 56843475 (+)
LOC118943926 NA coding downstream 1055077 57379129 ~ 57399437 (+)
G1882722 NA non-coding upstream 49824 56273651 ~ 56273861 (+)
G1882601 NA non-coding upstream 204812 56118640 ~ 56118873 (+)
G1882477 NA non-coding upstream 269269 56054000 ~ 56054416 (+)
G1882385 NA non-coding upstream 383169 55940288 ~ 55940516 (+)
G1882760 NA non-coding downstream 23114 56347166 ~ 56347423 (+)
G1882818 NA non-coding downstream 146313 56470365 ~ 56473133 (+)
G1882819 NA non-coding downstream 147323 56471375 ~ 56480266 (+)
G1882691 NA non-coding downstream 203040 56527092 ~ 56529013 (+)
G1882843 NA non-coding downstream 235370 56559422 ~ 56560072 (+)
G1881371 NA other upstream 1320013 55002782 ~ 55003672 (+)
G1879958 NA other upstream 2467955 53851671 ~ 53855730 (+)
LOC118943904 NA other upstream 2923398 53398184 ~ 53400297 (+)
G1879582 NA other upstream 2945499 53377810 ~ 53378186 (+)
G1878894 LOC106610502 other upstream 3463050 52857868 ~ 52860635 (+)
G1882830 NA other downstream 205743 56529795 ~ 56538483 (+)
G1882831 NA other downstream 209565 56533617 ~ 56543256 (+)
G1883457 NA other downstream 687985 57012037 ~ 57013218 (+)
G1885587 NA other downstream 2538162 58862214 ~ 58864502 (+)

Expression


Co-expression Network