G1883157


Basic Information

Item Value
gene id G1883157
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 56449952 ~ 56451779 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2154240
ACTCGTCACCATCGCCTAGCAACTGGCACTGGCTGCCTAGCAACAGCTATAGCCATATCCCTGTAGGAGGGGATGTGGCTACTCATGTGTGAGGTCATCGGTCCACTGTTACCGATGTGACCATCCCTCTTGGTGAGGATCTCTCTACACAAGGGGTGCTAGACAACATATTTTCACGGCATTAGACAACATGTTATCACTGCATTAGACAACATGTTATCACTGCATTAGACAACATGTTATCACTGCATTAGACAACATGTTATCACTGCATTAGACAACATGTTATCACTGCATTAGACAACATGTGCTCATAGCATTAGATAAGATGTGTTCACTGCATTAAACAACATGTGTTCACTGCATTAAACAATGTGTTAACTGCATTACATAATGTGATCACAGCATTAGACAACATTATTAAACAACATGTGTTCACTGCATTAAACAATGTGTTGACTGCATTACACAATGTGATCACAGCATTAGACAACAATTTTAAACAACATGCGTTCACTGCATTACACAATGTGATCACAGCATTAGACAACATTATTAAACAACATGTGTTCACTGCATTAAACAATGTGTTGACTGCATTACACAATGTGATCACAGCATTAGACAACATTATTAAACAGCGTGTTCACTGCATTAAACAATGTGTTGACTGCATTACACAATGTGATCACAGCGTTAGACAACATTATTAAACAGCGTGTTCACTGCATTTAAACAATGTGATCACAGCATTAGACAACATGTGTTCACTGCATTAGACAACATGTGTTCACTGCATTAGACAACATTTGCTCATGGCATTAAACAATGTGTTAACTGCATTACAAAATGTGCTCACAGCATTAGACAACATGTGTTCACTGCATTAGACAACATACACTCATTCAATTATAAAACATCTGTTCACTGCAATAGACATGTTGTCTAATAGACATTAGACAACATGTGGTCACTGCATTAGACAACATGTGTTCACATCATTAGACAACATAGGTTCACTGCACTAGGCAACATGTGTTCACTGCATTAGACAACATGTGTTCACTGCATTAGACAACAAGTGTTCACTGCATTAGACAACATATATTAGACAACCTGTGTTCACTGCATTAGACAACATATATTAGACAACATGTGCTCACTGCATTAGACAACATATATTAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2154240 True 1187 lncRNA 0.38 3 56449952 56451779

Neighbor

gene id symbol gene type direction distance location
LOC110503038 NA coding downstream 390357 56044331 ~ 56059595 (-)
LOC110502998 LOC106610959 coding downstream 465100 55981267 ~ 55984852 (-)
LOC110502996 LOC107666370 coding downstream 1245759 55190470 ~ 55204193 (-)
LOC110502991 NA coding downstream 1378806 55068829 ~ 55071146 (-)
LOC110502990 LOC106610860 coding downstream 1682287 54756179 ~ 54767665 (-)
LOC110503002 LOC106610976 coding upstream 308300 56760079 ~ 56780244 (-)
LOC110503005 LOC106611007 coding upstream 404801 56856580 ~ 56886643 (-)
LOC110503039 LOC106610997 coding upstream 455701 56907480 ~ 57068071 (-)
LOC110503007 LOC106586972 coding upstream 619548 57071327 ~ 57116725 (-)
LOC118943925 NA coding upstream 657281 57108428 ~ 57110865 (-)
G1883147 NA non-coding downstream 12312 56437240 ~ 56437640 (-)
G1883123 NA non-coding downstream 47651 56398231 ~ 56402301 (-)
G1883083 NA non-coding downstream 139519 56310180 ~ 56310433 (-)
G1883063 NA non-coding downstream 177264 56272440 ~ 56272688 (-)
G1883062 NA non-coding downstream 180200 56269549 ~ 56269752 (-)
G1883172 NA non-coding upstream 18800 56470579 ~ 56472951 (-)
G1883174 NA non-coding upstream 23536 56475315 ~ 56480038 (-)
G1883175 NA non-coding upstream 24762 56476541 ~ 56478029 (-)
G1883179 NA non-coding upstream 71615 56523394 ~ 56523838 (-)
G1883219 NA non-coding upstream 154227 56606006 ~ 56610640 (-)
G1881414 NA other downstream 1446328 55002766 ~ 55003624 (-)
G1880780 NA other downstream 2203266 54244782 ~ 54246686 (-)
LOC110503036 LOC106610742 other downstream 2376003 54039018 ~ 54073953 (-)
G1879406 NA other downstream 3285601 53163242 ~ 53164351 (-)
G1878770 NA other downstream 3806443 52643088 ~ 52643509 (-)
G1883244 NA other upstream 192228 56644007 ~ 56709888 (-)
LOC110503041 LOC106579580 other upstream 1138265 57590001 ~ 57616121 (-)
G1884227 NA other upstream 1282578 57734357 ~ 57735498 (-)

Expression


Co-expression Network