Gene
RNA
| Item | Value |
|---|---|
| gene id | G1882843 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 56559422 ~ 56560072 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2153893 | False | 234 | lncRNA | 0.41 | 2 | 56559422 | 56559879 |
| TU2153894 | True | 455 | lncRNA | 0.41 | 2 | 56559422 | 56560072 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502999 | NA | coding | upstream | 518068 | 55985543 ~ 56041354 (+) |
| LOC110502997 | LOC106610965 | coding | upstream | 620837 | 55935205 ~ 55938585 (+) |
| dync2li1 | dync2li1 | coding | upstream | 1377218 | 55173043 ~ 55182204 (+) |
| LOC110502992 | LOC106610889 | coding | upstream | 1389883 | 55071188 ~ 55169539 (+) |
| LOC118943891 | NA | coding | upstream | 1596684 | 54950534 ~ 54962738 (+) |
| LOC110503001 | LOC106611028 | coding | downstream | 52994 | 56613066 ~ 56727194 (+) |
| LOC118943924 | NA | coding | downstream | 142659 | 56701366 ~ 56709966 (+) |
| LOC110503003 | LOC106611055 | coding | downstream | 252332 | 56812404 ~ 56828732 (+) |
| LOC110503004 | LOC106611018 | coding | downstream | 268984 | 56829056 ~ 56843475 (+) |
| LOC118943926 | NA | coding | downstream | 819057 | 57379129 ~ 57399437 (+) |
| G1882691 | NA | non-coding | upstream | 30409 | 56527092 ~ 56529013 (+) |
| G1882819 | NA | non-coding | upstream | 79156 | 56471375 ~ 56480266 (+) |
| G1882818 | NA | non-coding | upstream | 86289 | 56470365 ~ 56473133 (+) |
| G1882760 | NA | non-coding | upstream | 211999 | 56347166 ~ 56347423 (+) |
| G1882750 | NA | non-coding | upstream | 235370 | 56323685 ~ 56324052 (+) |
| G1882844 | NA | non-coding | downstream | 1560 | 56561632 ~ 56562512 (+) |
| G1882845 | NA | non-coding | downstream | 2630 | 56562702 ~ 56564506 (+) |
| G1882693 | NA | non-coding | downstream | 87099 | 56647171 ~ 56647988 (+) |
| G1882883 | NA | non-coding | downstream | 111388 | 56671460 ~ 56671845 (+) |
| G1882884 | NA | non-coding | downstream | 112489 | 56672561 ~ 56672944 (+) |
| G1882831 | NA | other | upstream | 16166 | 56533617 ~ 56543256 (+) |
| G1882830 | NA | other | upstream | 20939 | 56529795 ~ 56538483 (+) |
| G1881371 | NA | other | upstream | 1555750 | 55002782 ~ 55003672 (+) |
| G1879958 | NA | other | upstream | 2703692 | 53851671 ~ 53855730 (+) |
| LOC118943904 | NA | other | upstream | 3159135 | 53398184 ~ 53400297 (+) |
| G1883457 | NA | other | downstream | 451965 | 57012037 ~ 57013218 (+) |
| G1885587 | NA | other | downstream | 2302142 | 58862214 ~ 58864502 (+) |
| G1886557 | NA | other | downstream | 3164192 | 59724264 ~ 59736661 (+) |
| G1886558 | NA | other | downstream | 3167674 | 59727746 ~ 59736471 (+) |
