G1882884


Basic Information

Item Value
gene id G1882884
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 56672561 ~ 56672944 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2153936
cctggtggaggagagaggctgtggtagaggagagtgggagaggacaAACTGGTAGAGGAAactagggtagaggagagagggagaggagatactGTTGTAGAGGAGATACTGTGGTATAGGAGAGACTGAggtagaggagaaagggagaggaaaggctgtgggagaggagaggctctggtagaggggagagagagaggagcgagactgtgccagaggaggtagaggagaggctgtggtagaggagagagagagaggagagagactgtggtagaggagggagaggaaaggctgtggtagaggagagactgtggcagaggaggtagagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2153936 True 326 lncRNA 0.56 2 56672561 56672944

Neighbor

gene id symbol gene type direction distance location
LOC110503000 prkce coding upstream 61803 56311640 ~ 56610758 (+)
LOC110502999 NA coding upstream 631207 55985543 ~ 56041354 (+)
LOC110502997 LOC106610965 coding upstream 733976 55935205 ~ 55938585 (+)
dync2li1 dync2li1 coding upstream 1490357 55173043 ~ 55182204 (+)
LOC110502992 LOC106610889 coding upstream 1503022 55071188 ~ 55169539 (+)
LOC118943924 NA coding downstream 29787 56701366 ~ 56709966 (+)
LOC110503003 LOC106611055 coding downstream 139460 56812404 ~ 56828732 (+)
LOC110503004 LOC106611018 coding downstream 156112 56829056 ~ 56843475 (+)
LOC118943926 NA coding downstream 706185 57379129 ~ 57399437 (+)
LOC110503012 LOC106611138 coding downstream 826750 57499694 ~ 57540368 (+)
G1882883 NA non-coding upstream 716 56671460 ~ 56671845 (+)
G1882693 NA non-coding upstream 24573 56647171 ~ 56647988 (+)
G1882845 NA non-coding upstream 108055 56562702 ~ 56564506 (+)
G1882844 NA non-coding upstream 110049 56561632 ~ 56562512 (+)
G1882843 NA non-coding upstream 112489 56559422 ~ 56560072 (+)
G1882891 NA non-coding downstream 21822 56694766 ~ 56695155 (+)
G1882901 NA non-coding downstream 55306 56728250 ~ 56728466 (+)
G1882902 NA non-coding downstream 55679 56728623 ~ 56765655 (+)
G1883403 NA non-coding downstream 224138 56897082 ~ 56897577 (+)
G1882831 NA other upstream 129305 56533617 ~ 56543256 (+)
G1882830 NA other upstream 134078 56529795 ~ 56538483 (+)
G1881371 NA other upstream 1668889 55002782 ~ 55003672 (+)
G1879958 NA other upstream 2816831 53851671 ~ 53855730 (+)
LOC118943904 NA other upstream 3272274 53398184 ~ 53400297 (+)
LOC110503001 LOC106611028 other downstream 304 56613066 ~ 56727194 (+)
G1883457 NA other downstream 339093 57012037 ~ 57013218 (+)
G1885587 NA other downstream 2189270 58862214 ~ 58864502 (+)
G1886557 NA other downstream 3051320 59724264 ~ 59736661 (+)
G1886558 NA other downstream 3054802 59727746 ~ 59736471 (+)

Expression


Co-expression Network