G1882902


Basic Information

Item Value
gene id G1882902
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 56728623 ~ 56765655 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2153955
ATAtaatattttcagctgtttgtagctggtgtacaaaacctaaagtaaaagatgcaaaaacaaaacttaagaatgggaagcatgcTTTCAATGAAAATTGTattatctataactcacatttctatgtgaatttggtcaggttgccAGTTTTACAACCTTATAAAAACAATTttcattttcccaccagagatgcgataccatcaaattgacttgttgctgATAAAAAGCTGTGTGATGTCAAGGTGCACATAAAAACACCCTTTGCTGATAAATTCATATGTACCAAACACAAAATACAAGTTAAAcgggtttccattgcattttcaactatACTGATGGTTTTCTCATAAGAAATGTtgcattatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgcatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaactttttcaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgaaattgtttcccattcctccttgcaaaacagctcaagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagaatccatcaggtttttttccagaatggtcctgtatttggctcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2153955 True 966 lncRNA 0.37 2 56728623 56765655

Neighbor

gene id symbol gene type direction distance location
LOC118943924 NA coding upstream 18657 56701366 ~ 56709966 (+)
LOC110503001 LOC106611028 coding upstream 27639 56613066 ~ 56727194 (+)
LOC110503000 prkce coding upstream 117865 56311640 ~ 56610758 (+)
LOC110502999 NA coding upstream 687269 55985543 ~ 56041354 (+)
LOC110502997 LOC106610965 coding upstream 790038 55935205 ~ 55938585 (+)
LOC110503003 LOC106611055 coding downstream 46749 56812404 ~ 56828732 (+)
LOC110503004 LOC106611018 coding downstream 63401 56829056 ~ 56843475 (+)
LOC118943926 NA coding downstream 613474 57379129 ~ 57399437 (+)
LOC110503012 LOC106611138 coding downstream 734039 57499694 ~ 57540368 (+)
LOC110503013 NA coding downstream 779620 57545275 ~ 57550796 (+)
G1882901 NA non-coding upstream 157 56728250 ~ 56728466 (+)
G1882891 NA non-coding upstream 33468 56694766 ~ 56695155 (+)
G1882884 NA non-coding upstream 55679 56672561 ~ 56672944 (+)
G1882883 NA non-coding upstream 56778 56671460 ~ 56671845 (+)
G1883403 NA non-coding downstream 131427 56897082 ~ 56897577 (+)
G1883408 NA non-coding downstream 136502 56902157 ~ 56903028 (+)
G1883412 NA non-coding downstream 158652 56924307 ~ 56935226 (+)
G1883413 NA non-coding downstream 165623 56931278 ~ 56932341 (+)
G1883414 NA non-coding downstream 169776 56935431 ~ 56935773 (+)
G1882831 NA other upstream 185367 56533617 ~ 56543256 (+)
G1882830 NA other upstream 190140 56529795 ~ 56538483 (+)
G1881371 NA other upstream 1724951 55002782 ~ 55003672 (+)
G1879958 NA other upstream 2872893 53851671 ~ 53855730 (+)
G1883457 NA other downstream 246382 57012037 ~ 57013218 (+)
G1885587 NA other downstream 2096559 58862214 ~ 58864502 (+)
G1886557 NA other downstream 2958609 59724264 ~ 59736661 (+)
G1886558 NA other downstream 2962091 59727746 ~ 59736471 (+)
G1886560 NA other downstream 2984063 59749718 ~ 59786095 (+)

Expression


Co-expression Network