Gene
RNA
| Item | Value |
|---|---|
| gene id | G1883397 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 56891414 ~ 56891718 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC111500801, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2154557 | True | 305 | lncRNA | 0.39 | 1 | 56891414 | 56891718 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503005 | LOC106611007 | coding | downstream | 4771 | 56856580 ~ 56886643 (-) |
| LOC110503002 | LOC106610976 | coding | downstream | 111170 | 56760079 ~ 56780244 (-) |
| LOC110503038 | NA | coding | downstream | 831819 | 56044331 ~ 56059595 (-) |
| LOC110502998 | LOC106610959 | coding | downstream | 906562 | 55981267 ~ 55984852 (-) |
| LOC110502996 | LOC107666370 | coding | downstream | 1687221 | 55190470 ~ 55204193 (-) |
| LOC110503039 | LOC106610997 | coding | upstream | 15762 | 56907480 ~ 57068071 (-) |
| LOC110503007 | LOC106586972 | coding | upstream | 179609 | 57071327 ~ 57116725 (-) |
| LOC118943925 | NA | coding | upstream | 217342 | 57108428 ~ 57110865 (-) |
| LOC110503010 | LOC106590975 | coding | upstream | 447809 | 57339527 ~ 57381651 (-) |
| LOC110503011 | LOC106611131 | coding | upstream | 497892 | 57389610 ~ 57433456 (-) |
| G1883396 | NA | non-coding | downstream | 1255 | 56889929 ~ 56890159 (-) |
| G1883392 | NA | non-coding | downstream | 2642 | 56888555 ~ 56888772 (-) |
| G1883306 | NA | non-coding | downstream | 116399 | 56732793 ~ 56775015 (-) |
| G1883244 | NA | non-coding | downstream | 181526 | 56644007 ~ 56709888 (-) |
| G1883271 | NA | non-coding | downstream | 214054 | 56675707 ~ 56677360 (-) |
| G1883574 | NA | non-coding | upstream | 11653 | 56903371 ~ 56905418 (-) |
| G1883632 | NA | non-coding | upstream | 120122 | 57011840 ~ 57013267 (-) |
| G1883659 | NA | non-coding | upstream | 167898 | 57059616 ~ 57059895 (-) |
| G1883676 | NA | non-coding | upstream | 225777 | 57117495 ~ 57118395 (-) |
| G1883219 | NA | other | downstream | 280774 | 56606006 ~ 56610640 (-) |
| G1881414 | NA | other | downstream | 1887790 | 55002766 ~ 55003624 (-) |
| G1880780 | NA | other | downstream | 2644728 | 54244782 ~ 54246686 (-) |
| LOC110503036 | LOC106610742 | other | downstream | 2817465 | 54039018 ~ 54073953 (-) |
| LOC110503041 | LOC106579580 | other | upstream | 698326 | 57590001 ~ 57616121 (-) |
| G1884227 | NA | other | upstream | 842639 | 57734357 ~ 57735498 (-) |
| G1885150 | NA | other | upstream | 1342501 | 58234219 ~ 58242567 (-) |
| G1885863 | NA | other | upstream | 2197955 | 59089673 ~ 59090564 (-) |
