G1883925 (LOC106611114)


Basic Information

Item Value
gene id G1883925
gene name LOC106611114
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 57256502 ~ 57257169 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2155136
GAAATAATCAAGCATGACAAGAGTGATAGCAAGTATAGTTCATCACATGAAACCTTGCAGAATCTTTAAGcgcctctgtttctctccatcagtaTGTCTTCTTAAGCACATTCTCCTGCAGGGTTCTCTCCAGTGTGTCTCAACCTTTTCATTAAGACAAGCAGTCTATGGTCTTTACTCCTTAAAGGAGCGCTTAAATTAAGTCAGCTACTCATCTCTCGGACTGAAAGTCTCATCCCACAGACCAGCGCCTGTCCACGGACTAGAAGTCGAGAAACACTGCTCAGTTCTACCTGGAGTTGCTGGTCTCTGCCAGCCTGTTGTTCATGATCCCCAGAGCGCCCACTCCTCCAGAGAACCCGTTATGTCTCGAGCCGCCACACACCGTCCTGGGATAACCGTTAGCGGACTCTGATAACTGCTTCTGCATGAGTGCCAGTGAGACCTTATTCGAGGCCGTCAGGTCCTTCATTGAAATCATCTCGCCCGAGAGTCTGCGTCCTCCTCCCTCCATGTCGCTTTCGCAGGGTCCCGAATCCCCCGAGTCCGGCGTGCGTTTGATTCGGAAGCGACCTTTACGGATTCTCGAACCAGGCCGGATGGCGTTGCGGCGACCCAATGGGAAAGAGTTGGACTTGAATTTACACCGCTGGCAGCATAAGTTCTGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2155136 True 668 lncRNA 0.51 1 57256502 57257169

Neighbor

gene id symbol gene type direction distance location
LOC110503007 LOC106586972 coding downstream 139777 57071327 ~ 57116725 (-)
LOC118943925 NA coding downstream 145637 57108428 ~ 57110865 (-)
LOC110503039 LOC106610997 coding downstream 188431 56907480 ~ 57068071 (-)
LOC110503005 LOC106611007 coding downstream 369859 56856580 ~ 56886643 (-)
LOC110503002 LOC106610976 coding downstream 476258 56760079 ~ 56780244 (-)
LOC110503010 LOC106590975 coding upstream 82358 57339527 ~ 57381651 (-)
LOC110503011 LOC106611131 coding upstream 132441 57389610 ~ 57433456 (-)
LOC110503041 LOC106579580 coding upstream 332832 57590001 ~ 57616121 (-)
LOC110503044 nrxn1 coding upstream 771489 58028658 ~ 58767213 (-)
gpr75 gpr75 coding upstream 2089414 59346393 ~ 59351909 (-)
G1883924 NA non-coding downstream 162 57256100 ~ 57256340 (-)
G1883909 NA non-coding downstream 20636 57235535 ~ 57235866 (-)
G1883907 NA non-coding downstream 24094 57232133 ~ 57232408 (-)
G1883904 LOC107662719 non-coding downstream 27025 57229209 ~ 57229477 (-)
G1883898 NA non-coding downstream 42004 57214257 ~ 57214498 (-)
G1883926 NA non-coding upstream 143 57257312 ~ 57258941 (-)
G1883940 LOC106570150 non-coding upstream 27850 57285019 ~ 57285269 (-)
G1883941 NA non-coding upstream 28312 57285481 ~ 57285696 (-)
G1883944 NA non-coding upstream 33427 57290596 ~ 57290840 (-)
G1883955 NA non-coding upstream 50669 57307838 ~ 57308101 (-)
G1883244 NA other downstream 546614 56644007 ~ 56709888 (-)
G1883219 NA other downstream 645862 56606006 ~ 56610640 (-)
G1881414 NA other downstream 2252878 55002766 ~ 55003624 (-)
G1880780 NA other downstream 3009816 54244782 ~ 54246686 (-)
G1884227 NA other upstream 477188 57734357 ~ 57735498 (-)
G1885150 NA other upstream 977050 58234219 ~ 58242567 (-)
G1885863 NA other upstream 1832504 59089673 ~ 59090564 (-)

Expression


Co-expression Network