G1883763


Basic Information

Item Value
gene id G1883763
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 57284627 ~ 57285001 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2154968
ATCATATGTCCCACTTTATGACAATAGAGACAGGAACGCTCAGTCTTCTGGCGTGCTTGATATACTACTGCTGGCCGACTAGGGCTAAAGGTAGGAAACTCAGTGGCTCTACTCTCAGTTTGAGCCGAAAACACACTCTTGTGCGTCAACACAAACTCGTCTGCCAACACAGACGCTTCTGCCAGGGAGGATACTTTCTGTTCGTTTAGGTAAACTACAATGCGTTCGGGTAAGCAATTTTTAAACTCTTCCAACAAGATTAACTCCCGGAGAGAGTTGAAATCAGTTACCTTACTAGCAGCATGCCATTTATCAAACAGATTTCCCTTGTCTCTAGCAAATTCCACATAAGTCTTACTAGAATACTTTCTATGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107091561

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2154968 True 375 lncRNA 0.43 1 57284627 57285001

Neighbor

gene id symbol gene type direction distance location
LOC110503004 LOC106611018 coding upstream 441152 56829056 ~ 56843475 (+)
LOC110503003 LOC106611055 coding upstream 455895 56812404 ~ 56828732 (+)
LOC118943924 NA coding upstream 574661 56701366 ~ 56709966 (+)
LOC110503001 LOC106611028 coding upstream 583643 56613066 ~ 56727194 (+)
LOC110503000 prkce coding upstream 673869 56311640 ~ 56610758 (+)
LOC118943926 NA coding downstream 94128 57379129 ~ 57399437 (+)
LOC110503012 LOC106611138 coding downstream 214693 57499694 ~ 57540368 (+)
LOC110503013 NA coding downstream 260274 57545275 ~ 57550796 (+)
LOC110503040 LOC106579579 coding downstream 285745 57570746 ~ 57588495 (+)
LOC118943835 NA coding downstream 1579614 58864615 ~ 58865931 (+)
G1883730 NA non-coding upstream 13968 57269340 ~ 57270659 (+)
G1883729 NA non-coding upstream 16578 57260594 ~ 57268049 (+)
G1883747 NA non-coding upstream 49311 57235051 ~ 57235316 (+)
G1883740 NA non-coding upstream 64957 57219381 ~ 57219670 (+)
G1883517 NA non-coding upstream 175918 57108432 ~ 57108709 (+)
G1883767 NA non-coding downstream 3405 57288406 ~ 57288621 (+)
G1883776 NA non-coding downstream 22928 57307929 ~ 57308163 (+)
G1883779 NA non-coding downstream 28933 57313934 ~ 57314372 (+)
G1883796 NA non-coding downstream 50399 57335400 ~ 57335619 (+)
G1883811 NA non-coding downstream 101110 57386111 ~ 57386631 (+)
G1883457 NA other upstream 271409 57012037 ~ 57013218 (+)
G1882831 NA other upstream 741371 56533617 ~ 56543256 (+)
G1882830 NA other upstream 746144 56529795 ~ 56538483 (+)
G1881371 NA other upstream 2280955 55002782 ~ 55003672 (+)
G1885587 NA other downstream 1577213 58862214 ~ 58864502 (+)
G1886557 NA other downstream 2439263 59724264 ~ 59736661 (+)
G1886558 NA other downstream 2442745 59727746 ~ 59736471 (+)
G1886560 NA other downstream 2464717 59749718 ~ 59786095 (+)
G1886561 NA other downstream 2498985 59783986 ~ 59787989 (+)

Expression


Co-expression Network