Gene
RNA
| Item | Value |
|---|---|
| gene id | G1883767 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 57288406 ~ 57288621 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb2 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2154972 | True | 216 | lncRNA | 0.48 | 1 | 57288406 | 57288621 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503004 | LOC106611018 | coding | upstream | 444931 | 56829056 ~ 56843475 (+) |
| LOC110503003 | LOC106611055 | coding | upstream | 459674 | 56812404 ~ 56828732 (+) |
| LOC118943924 | NA | coding | upstream | 578440 | 56701366 ~ 56709966 (+) |
| LOC110503001 | LOC106611028 | coding | upstream | 587422 | 56613066 ~ 56727194 (+) |
| LOC110503000 | prkce | coding | upstream | 677648 | 56311640 ~ 56610758 (+) |
| LOC118943926 | NA | coding | downstream | 90508 | 57379129 ~ 57399437 (+) |
| LOC110503012 | LOC106611138 | coding | downstream | 211073 | 57499694 ~ 57540368 (+) |
| LOC110503013 | NA | coding | downstream | 256654 | 57545275 ~ 57550796 (+) |
| LOC110503040 | LOC106579579 | coding | downstream | 282125 | 57570746 ~ 57588495 (+) |
| LOC118943835 | NA | coding | downstream | 1575994 | 58864615 ~ 58865931 (+) |
| G1883763 | NA | non-coding | upstream | 3405 | 57284627 ~ 57285001 (+) |
| G1883730 | NA | non-coding | upstream | 17747 | 57269340 ~ 57270659 (+) |
| G1883729 | NA | non-coding | upstream | 20357 | 57260594 ~ 57268049 (+) |
| G1883747 | NA | non-coding | upstream | 53090 | 57235051 ~ 57235316 (+) |
| G1883740 | NA | non-coding | upstream | 68736 | 57219381 ~ 57219670 (+) |
| G1883776 | NA | non-coding | downstream | 19308 | 57307929 ~ 57308163 (+) |
| G1883779 | NA | non-coding | downstream | 25313 | 57313934 ~ 57314372 (+) |
| G1883796 | NA | non-coding | downstream | 46779 | 57335400 ~ 57335619 (+) |
| G1883811 | NA | non-coding | downstream | 97490 | 57386111 ~ 57386631 (+) |
| G1883814 | NA | non-coding | downstream | 102494 | 57391115 ~ 57393464 (+) |
| G1883457 | NA | other | upstream | 275188 | 57012037 ~ 57013218 (+) |
| G1882831 | NA | other | upstream | 745150 | 56533617 ~ 56543256 (+) |
| G1882830 | NA | other | upstream | 749923 | 56529795 ~ 56538483 (+) |
| G1881371 | NA | other | upstream | 2284734 | 55002782 ~ 55003672 (+) |
| G1885587 | NA | other | downstream | 1573593 | 58862214 ~ 58864502 (+) |
| G1886557 | NA | other | downstream | 2435643 | 59724264 ~ 59736661 (+) |
| G1886558 | NA | other | downstream | 2439125 | 59727746 ~ 59736471 (+) |
| G1886560 | NA | other | downstream | 2461097 | 59749718 ~ 59786095 (+) |
| G1886561 | NA | other | downstream | 2495365 | 59783986 ~ 59787989 (+) |
