G1883796


Basic Information

Item Value
gene id G1883796
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 57335400 ~ 57335619 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2155007
ctcctgaagtgtgcactcctTCCCATGcgtttaaaagtatttggttggTGTAAGCATGGGCTAGTGGAAGTTTCTACCATATTTCTTTCACCATTTCTTTGCTATTACATCTGAAGTGATAAGGTGAATACTTAGCGCCCAATTCAGACTCAAGATAAGTGGGCTTAAGTGAATAAAACTGACTTAAGTCAGTAATGTTTGCCTTAAGTAAACTTATTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2155007 True 220 lncRNA 0.38 1 57335400 57335619

Neighbor

gene id symbol gene type direction distance location
LOC110503004 LOC106611018 coding upstream 491925 56829056 ~ 56843475 (+)
LOC110503003 LOC106611055 coding upstream 506668 56812404 ~ 56828732 (+)
LOC118943924 NA coding upstream 625434 56701366 ~ 56709966 (+)
LOC110503001 LOC106611028 coding upstream 634416 56613066 ~ 56727194 (+)
LOC110503000 prkce coding upstream 724642 56311640 ~ 56610758 (+)
LOC118943926 NA coding downstream 43510 57379129 ~ 57399437 (+)
LOC110503012 LOC106611138 coding downstream 164075 57499694 ~ 57540368 (+)
LOC110503013 NA coding downstream 209656 57545275 ~ 57550796 (+)
LOC110503040 LOC106579579 coding downstream 235127 57570746 ~ 57588495 (+)
LOC118943835 NA coding downstream 1528996 58864615 ~ 58865931 (+)
G1883779 NA non-coding upstream 21028 57313934 ~ 57314372 (+)
G1883776 NA non-coding upstream 27237 57307929 ~ 57308163 (+)
G1883767 NA non-coding upstream 46779 57288406 ~ 57288621 (+)
G1883763 NA non-coding upstream 50399 57284627 ~ 57285001 (+)
G1883730 NA non-coding upstream 64741 57269340 ~ 57270659 (+)
G1883811 NA non-coding downstream 50492 57386111 ~ 57386631 (+)
G1883814 NA non-coding downstream 55496 57391115 ~ 57393464 (+)
G1883843 NA non-coding downstream 123822 57459441 ~ 57459859 (+)
G1883848 NA non-coding downstream 135729 57471348 ~ 57471642 (+)
G1883849 NA non-coding downstream 137549 57473168 ~ 57473395 (+)
G1883457 NA other upstream 322182 57012037 ~ 57013218 (+)
G1882831 NA other upstream 792144 56533617 ~ 56543256 (+)
G1882830 NA other upstream 796917 56529795 ~ 56538483 (+)
G1881371 NA other upstream 2331728 55002782 ~ 55003672 (+)
G1885587 NA other downstream 1526595 58862214 ~ 58864502 (+)
G1886557 NA other downstream 2388645 59724264 ~ 59736661 (+)
G1886558 NA other downstream 2392127 59727746 ~ 59736471 (+)
G1886560 NA other downstream 2414099 59749718 ~ 59786095 (+)
G1886561 NA other downstream 2448367 59783986 ~ 59787989 (+)

Expression


Co-expression Network