G1883843


Basic Information

Item Value
gene id G1883843
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 57459441 ~ 57459859 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2155054
ctctggcagctcgggacagatgggagactctggcagctcaggacagacgggagactctggcagcgctggacaggcgggagcacctgtagggaggagacggagagacagcctggtccggggggctgccaccggaaggctggtgcgtggaggcggCACCGGATAggccggaccgtggaggcgcactggaggtctcaagcACTGAGCCTgtccaaccctacctggctgaatgctccccgtagccaggccagtgcggcgaggtggaatagcccgcactgggctgtgctggcgaaccggggacaccatgcgtagggatggtgccatctacaccggcccgaggagacgcactggagaccagatgtgctgagccggcttcatggcacctggctcgatgcccactctagcccggcaatgtaccgggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2155054 True 419 lncRNA 0.67 1 57459441 57459859

Neighbor

gene id symbol gene type direction distance location
LOC118943926 NA coding upstream 60004 57379129 ~ 57399437 (+)
LOC110503004 LOC106611018 coding upstream 615966 56829056 ~ 56843475 (+)
LOC110503003 LOC106611055 coding upstream 630709 56812404 ~ 56828732 (+)
LOC118943924 NA coding upstream 749475 56701366 ~ 56709966 (+)
LOC110503001 LOC106611028 coding upstream 758457 56613066 ~ 56727194 (+)
LOC110503012 LOC106611138 coding downstream 39835 57499694 ~ 57540368 (+)
LOC110503013 NA coding downstream 85416 57545275 ~ 57550796 (+)
LOC110503040 LOC106579579 coding downstream 110887 57570746 ~ 57588495 (+)
LOC118943835 NA coding downstream 1404756 58864615 ~ 58865931 (+)
LOC110503019 LOC106611219 coding downstream 1876604 59336463 ~ 59345077 (+)
G1883814 NA non-coding upstream 65977 57391115 ~ 57393464 (+)
G1883811 NA non-coding upstream 72810 57386111 ~ 57386631 (+)
G1883796 NA non-coding upstream 123822 57335400 ~ 57335619 (+)
G1883779 NA non-coding upstream 145069 57313934 ~ 57314372 (+)
G1883776 NA non-coding upstream 151278 57307929 ~ 57308163 (+)
G1883848 NA non-coding downstream 11489 57471348 ~ 57471642 (+)
G1883849 NA non-coding downstream 13309 57473168 ~ 57473395 (+)
G1883850 NA non-coding downstream 14137 57473996 ~ 57474232 (+)
G1883863 NA non-coding downstream 36061 57495920 ~ 57496147 (+)
G1883879 NA non-coding downstream 99201 57559060 ~ 57559268 (+)
G1883457 NA other upstream 446223 57012037 ~ 57013218 (+)
G1882831 NA other upstream 916185 56533617 ~ 56543256 (+)
G1882830 NA other upstream 920958 56529795 ~ 56538483 (+)
G1881371 NA other upstream 2455769 55002782 ~ 55003672 (+)
G1885587 NA other downstream 1402355 58862214 ~ 58864502 (+)
G1886557 NA other downstream 2264405 59724264 ~ 59736661 (+)
G1886558 NA other downstream 2267887 59727746 ~ 59736471 (+)
G1886560 NA other downstream 2289859 59749718 ~ 59786095 (+)
G1886561 NA other downstream 2324127 59783986 ~ 59787989 (+)

Expression


Co-expression Network