G1883848


Basic Information

Item Value
gene id G1883848
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 57471348 ~ 57471642 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2155059
gtattagtattggtattggatagaacacactctgaaggttctaaaactgtttgaattatgtctgtgagtataacagaactcatatagcaggcaaaaacctgagaaataccacttcctgtttttttttcttctggaggtggcagattttcaaccaaggtctcattgaaattacagcgagatatggatgagttttcacttcctacaccttccactagatgtcagcagtcaatagaactttgtctgatgacactaatgtgaaggggggtcgattgacacaggaaatagtcaccacagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2155059 True 295 lncRNA 0.39 1 57471348 57471642

Neighbor

gene id symbol gene type direction distance location
LOC118943926 NA coding upstream 71911 57379129 ~ 57399437 (+)
LOC110503004 LOC106611018 coding upstream 627873 56829056 ~ 56843475 (+)
LOC110503003 LOC106611055 coding upstream 642616 56812404 ~ 56828732 (+)
LOC118943924 NA coding upstream 761382 56701366 ~ 56709966 (+)
LOC110503001 LOC106611028 coding upstream 770364 56613066 ~ 56727194 (+)
LOC110503012 LOC106611138 coding downstream 28052 57499694 ~ 57540368 (+)
LOC110503013 NA coding downstream 73633 57545275 ~ 57550796 (+)
LOC110503040 LOC106579579 coding downstream 99104 57570746 ~ 57588495 (+)
LOC118943835 NA coding downstream 1392973 58864615 ~ 58865931 (+)
LOC110503019 LOC106611219 coding downstream 1864821 59336463 ~ 59345077 (+)
G1883843 NA non-coding upstream 11489 57459441 ~ 57459859 (+)
G1883814 NA non-coding upstream 77884 57391115 ~ 57393464 (+)
G1883811 NA non-coding upstream 84717 57386111 ~ 57386631 (+)
G1883796 NA non-coding upstream 135729 57335400 ~ 57335619 (+)
G1883779 NA non-coding upstream 156976 57313934 ~ 57314372 (+)
G1883849 NA non-coding downstream 1526 57473168 ~ 57473395 (+)
G1883850 NA non-coding downstream 2354 57473996 ~ 57474232 (+)
G1883863 NA non-coding downstream 24278 57495920 ~ 57496147 (+)
G1883879 NA non-coding downstream 87418 57559060 ~ 57559268 (+)
G1883881 NA non-coding downstream 90094 57561736 ~ 57562058 (+)
G1883457 NA other upstream 458130 57012037 ~ 57013218 (+)
G1882831 NA other upstream 928092 56533617 ~ 56543256 (+)
G1882830 NA other upstream 932865 56529795 ~ 56538483 (+)
G1881371 NA other upstream 2467676 55002782 ~ 55003672 (+)
G1885587 NA other downstream 1390572 58862214 ~ 58864502 (+)
G1886557 NA other downstream 2252622 59724264 ~ 59736661 (+)
G1886558 NA other downstream 2256104 59727746 ~ 59736471 (+)
G1886560 NA other downstream 2278076 59749718 ~ 59786095 (+)
G1886561 NA other downstream 2312344 59783986 ~ 59787989 (+)

Expression


Co-expression Network