G1884027



Basic Information


Item Value
gene id G1884027
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 57483393 ~ 57483658 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2155247
cctccacgtgtctgtatgacctccctacaacgcctgggcatgctcctgatgaggtggcggatggtctcctgagggatctcctcccagacctggactaaagcatccgccaactcctggacagtctgtggtgtaacgtggcgttggtggatggagcgagacatgatgtcccagatgtgctcaattggattcaggtctggggaacgggcgggccagtccatagcatcaatgccttcctcttgcaggaactgctgacacactccagccac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2155247 True 266 lncRNA 0.58 1 57483393 57483658

Neighbor


gene id symbol gene type direction distance location
LOC110503011 LOC106611131 coding downstream 49937 57389610 ~ 57433456 (-)
LOC110503010 LOC106590975 coding downstream 101742 57339527 ~ 57381651 (-)
LOC110503007 LOC106586972 coding downstream 366668 57071327 ~ 57116725 (-)
LOC118943925 NA coding downstream 372528 57108428 ~ 57110865 (-)
LOC110503039 LOC106610997 coding downstream 415322 56907480 ~ 57068071 (-)
LOC110503041 LOC106579580 coding upstream 106343 57590001 ~ 57616121 (-)
LOC110503044 nrxn1 coding upstream 545000 58028658 ~ 58767213 (-)
gpr75 gpr75 coding upstream 1862925 59346393 ~ 59351909 (-)
LOC110503043 LOC106611227 coding upstream 1872149 59355807 ~ 59454278 (-)
LOC118943927 NA coding upstream 1980513 59464171 ~ 59466881 (-)
G1884026 NA non-coding downstream 694 57482419 ~ 57482699 (-)
G1884024 NA non-coding downstream 4239 57478910 ~ 57479154 (-)
G1884019 NA non-coding downstream 13038 57469976 ~ 57470355 (-)
G1884014 NA non-coding downstream 18570 57464588 ~ 57464823 (-)
G1884006 NA non-coding downstream 35328 57447855 ~ 57448065 (-)
G1884031 NA non-coding upstream 2887 57486545 ~ 57486750 (-)
G1884032 NA non-coding upstream 3635 57487293 ~ 57487609 (-)
G1884046 LOC106611138 non-coding upstream 45703 57529361 ~ 57530292 (-)
G1884056 NA non-coding upstream 69170 57552828 ~ 57553061 (-)
G1884069 NA non-coding upstream 85207 57568865 ~ 57569225 (-)
G1883244 NA other downstream 773505 56644007 ~ 56709888 (-)
G1883219 NA other downstream 872753 56606006 ~ 56610640 (-)
G1881414 NA other downstream 2479769 55002766 ~ 55003624 (-)
G1880780 NA other downstream 3236707 54244782 ~ 54246686 (-)
G1884227 NA other upstream 250699 57734357 ~ 57735498 (-)
G1885150 NA other upstream 750561 58234219 ~ 58242567 (-)
G1885863 NA other upstream 1606015 59089673 ~ 59090564 (-)

Expression



Co-expression Network