G1883879


Basic Information

Item Value
gene id G1883879
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 57559060 ~ 57559268 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2155090
acaccaaactgaaagtcttccgactagcttggaaagacagtactgtgcagtaccgaagagcccttactgctgctcgatcatcctatttttctaacttaattgaggaaaataagaagaatccgaaattcctttttgatactgtcgcaaagctaactaaaaagcagcattccccaagagaggatgactttcactttagcagtgataaattc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2155090 True 209 lncRNA 0.40 1 57559060 57559268

Neighbor

gene id symbol gene type direction distance location
LOC110503013 NA coding upstream 8264 57545275 ~ 57550796 (+)
LOC110503012 LOC106611138 coding upstream 18692 57499694 ~ 57540368 (+)
LOC118943926 NA coding upstream 159623 57379129 ~ 57399437 (+)
LOC110503004 LOC106611018 coding upstream 715585 56829056 ~ 56843475 (+)
LOC110503003 LOC106611055 coding upstream 730328 56812404 ~ 56828732 (+)
LOC110503040 LOC106579579 coding downstream 11478 57570746 ~ 57588495 (+)
LOC118943835 NA coding downstream 1305347 58864615 ~ 58865931 (+)
LOC110503019 LOC106611219 coding downstream 1777195 59336463 ~ 59345077 (+)
LOC118943836 NA coding downstream 2021831 59581099 ~ 59581875 (+)
LOC110503016 LOC106611257 coding downstream 2144126 59703394 ~ 59816421 (+)
G1883863 NA non-coding upstream 62913 57495920 ~ 57496147 (+)
G1883850 NA non-coding upstream 84828 57473996 ~ 57474232 (+)
G1883849 NA non-coding upstream 85665 57473168 ~ 57473395 (+)
G1883848 NA non-coding upstream 87418 57471348 ~ 57471642 (+)
G1883843 NA non-coding upstream 99201 57459441 ~ 57459859 (+)
G1883881 NA non-coding downstream 2468 57561736 ~ 57562058 (+)
G1884093 NA non-coding downstream 30777 57590045 ~ 57590267 (+)
G1884095 NA non-coding downstream 33892 57593160 ~ 57593406 (+)
G1884099 NA non-coding downstream 37278 57596546 ~ 57596777 (+)
G1884173 NA non-coding downstream 112609 57671877 ~ 57676345 (+)
G1883457 NA other upstream 545842 57012037 ~ 57013218 (+)
LOC110503001 LOC106611028 other upstream 831866 56613066 ~ 56727194 (+)
G1882831 NA other upstream 1015804 56533617 ~ 56543256 (+)
G1882830 NA other upstream 1020577 56529795 ~ 56538483 (+)
G1881371 NA other upstream 2555388 55002782 ~ 55003672 (+)
G1885587 NA other downstream 1302946 58862214 ~ 58864502 (+)
G1886557 NA other downstream 2164996 59724264 ~ 59736661 (+)
G1886558 NA other downstream 2168478 59727746 ~ 59736471 (+)
G1886560 NA other downstream 2190450 59749718 ~ 59786095 (+)
G1886561 NA other downstream 2224718 59783986 ~ 59787989 (+)

Expression


Co-expression Network