G1884212


Basic Information

Item Value
gene id G1884212
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 57699830 ~ 57725201 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2155473
acattagacagactggtgtagatggagacattagacagactggtgtagagggagacattagacagtctggtgtagatggagacattagacagtctggtgtagatggagacattagacagactggtgtagagggagacattagacagtctggtgtagagggagacattagacagactggtgtagagggagacattagacagtctggtgtagatggagacattagacagtatgtggtgtagagggagacattagacagtatgtggtgtagagggagacattagacagtctggtgtagagggagacattagacagtctggtgtagatggagacattagacagtctggtgtagagggagacattagacagtctgtggtgtagagggagacattagacagtctggtgtagagggagacattagacagtctggtgtagagggagacattagacagtatgtggtgtagagggagacattagacagtctgtggtgtagagggagacattagacattctgtagtgtagagggagacattagacagtctggtgtagagggagacattagacagtatgtggtgtagagggagacattagacagtctggtgtagatggagacattagacaggctgtggtgtagagggagacattagacagtatgtggtgtagagggagacattagacagtctggtgtagagggagacattagacagtatgtggtgtagagggagacattagacattatgtagtgtagagggagacattagacattctgtggtgtagatggagacattagacagtatgtagtgtagagggagacattagacattctgtagtgtagagggagacattagacagtatgtggtgtagagggagacattagacagtatgtagtgtagagggagacattagacattctgtggtgtagagggagacattagacagtatgtagtgtagagggagac
>TU2155476
ggagacattagaaagtctggtgtagagggagacattagacagactggtgtagagggagacattagacagtatggtgtagagggagacattagacagactggtgtagatggagacattagacattctgtagtgtagagggagacattagacagtctggtgtagagggagacattagacagactggtgtagagggagacattagacagtctggtgtagatggagacattagacagtatgtggtgtagagggagacattagacagtatgtggtgtagagggagacattagacagtctggtgtagagggagacattagacagtctggtgtagatggagacattagacagtctggtgtagagggagacattagacagtatgtggtgtagagggagacattagacagtctggtgtagagggagacattagacattctgtagtgtagagggagacattagacagtctggtgtagagggagacattagacagtctggtgtagagggagacattagacagtctggtgtagagggagacattagacagtctggtgtagagggagacattagacagtctggtgtagagggagacattagacagtctggtgtagagggagacattagacagtatgtggtgtagagggagacattagacagtctgtggtgtagagggagacattagacattctgtagtgtagagggagacattagacagtctggtgtagagggagacattagacagtatgtggtgtagagggagacattagacagtctggtgtagatggagacattagacaggctgtggtgtagagggagacattagacagtatgtggtgtagagggagacattagacagtctggtgtagagggagacattagacagtatgtggtgtagagggagacattagacattatgtagtgtagagggagacattagacattctgtggtgtagatggagacattagacagtatgtagtgtagagggagacattagacattctgtagtgtagagggagacattagacagtatgtggtgtagagggagacattagacagtatgtagtgtagagggagacattagacattctgtggtgtagagggagacattagacagtatgtagtgtagagggagac

Function

NR:

description
PREDICTED: eukaryotic translation initiation factor 3 subunit A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2155473 False 956 lncRNA 0.45 3 57699830 57725201
TU2155476 True 1126 lncRNA 0.45 3 57699830 57724228

Neighbor

gene id symbol gene type direction distance location
LOC110503041 LOC106579580 coding downstream 83709 57590001 ~ 57616121 (-)
LOC110503011 LOC106611131 coding downstream 266374 57389610 ~ 57433456 (-)
LOC110503010 LOC106590975 coding downstream 318179 57339527 ~ 57381651 (-)
LOC110503007 LOC106586972 coding downstream 583105 57071327 ~ 57116725 (-)
LOC110503044 nrxn1 coding upstream 303457 58028658 ~ 58767213 (-)
gpr75 gpr75 coding upstream 1621382 59346393 ~ 59351909 (-)
LOC110503043 LOC106611227 coding upstream 1630606 59355807 ~ 59454278 (-)
LOC118943927 NA coding upstream 1738970 59464171 ~ 59466881 (-)
LOC110503014 LOC106611248 coding upstream 2141779 59866980 ~ 59948191 (-)
G1884195 NA non-coding downstream 6697 57692880 ~ 57693133 (-)
G1884154 NA non-coding downstream 49202 57650267 ~ 57650628 (-)
G1884136 NA non-coding downstream 66613 57632865 ~ 57633217 (-)
G1884132 NA non-coding downstream 70299 57627007 ~ 57629531 (-)
G1884129 NA non-coding downstream 73920 57625505 ~ 57625910 (-)
G1884223 NA non-coding upstream 4651 57729852 ~ 57730072 (-)
G1884228 NA non-coding upstream 11462 57736663 ~ 57737105 (-)
G1884239 NA non-coding upstream 16674 57741875 ~ 57742106 (-)
G1884321 NA non-coding upstream 19903 57745104 ~ 57789252 (-)
G1884352 NA non-coding upstream 59545 57784746 ~ 57785245 (-)
G1883244 NA other downstream 989942 56644007 ~ 56709888 (-)
G1883219 NA other downstream 1089190 56606006 ~ 56610640 (-)
G1881414 NA other downstream 2696206 55002766 ~ 55003624 (-)
G1884227 NA other upstream 9156 57734357 ~ 57735498 (-)
G1885150 NA other upstream 509018 58234219 ~ 58242567 (-)
G1885863 NA other upstream 1364472 59089673 ~ 59090564 (-)
G1886825 NA other upstream 2241161 59966362 ~ 59966666 (-)

Expression


Co-expression Network