G1884501


Basic Information

Item Value
gene id G1884501
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 57985494 ~ 58045866 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2155786
tgcgaaagtattcggcccccttgaactttgcaaccttttgtcaagataggattggttgtatttagagttggttgtatctaaatgacaatttgatatatgcctgttgatatggacgGTTGGTTAatggttctggggtttgagaaaggagacaaagctgaacgatgaattatgccgatgctgtcttatcctgtgtgtgtctttgctataaaggacctcatttgaaatgtggaaggggctctcagagaattcatggttagacactgaattgcctgagagtcacaggattgtgatagagctcatataattaaaagatggactttgaaaactaactctgacttgtgttgtggtttgctcccatgatttggtaaatagaggaaatttccacgacacgtGTAAGCGCGtatgcacccggcccgccacaaggagtcgctagagagcGATGGCACAAGGACATCTCggccggccaaatcctcccctaaacCGGACTACGccgtgccaattg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2155786 True 502 lncRNA 0.45 2 57985494 58045866

Neighbor

gene id symbol gene type direction distance location
LOC110503040 LOC106579579 coding upstream 396999 57570746 ~ 57588495 (+)
LOC110503013 NA coding upstream 434698 57545275 ~ 57550796 (+)
LOC110503012 LOC106611138 coding upstream 445126 57499694 ~ 57540368 (+)
LOC118943926 NA coding upstream 586057 57379129 ~ 57399437 (+)
LOC110503004 LOC106611018 coding upstream 1142019 56829056 ~ 56843475 (+)
LOC118943835 NA coding downstream 818749 58864615 ~ 58865931 (+)
LOC110503019 LOC106611219 coding downstream 1290597 59336463 ~ 59345077 (+)
LOC118943836 NA coding downstream 1535233 59581099 ~ 59581875 (+)
LOC110503016 LOC106611257 coding downstream 1657528 59703394 ~ 59816421 (+)
LOC110503015 LOC106589751 coding downstream 1801245 59847111 ~ 59866775 (+)
G1884440 NA non-coding upstream 83107 57902140 ~ 57902387 (+)
G1884436 NA non-coding upstream 84528 57899730 ~ 57900966 (+)
G1884422 NA non-coding upstream 98688 57886493 ~ 57886806 (+)
G1884203 NA non-coding upstream 260815 57705434 ~ 57724679 (+)
G1884209 NA non-coding upstream 264943 57712915 ~ 57720551 (+)
G1884583 NA non-coding downstream 79029 58124895 ~ 58125695 (+)
G1884631 NA non-coding downstream 189234 58235100 ~ 58243509 (+)
G1884794 NA non-coding downstream 445127 58490993 ~ 58497417 (+)
G1884854 NA non-coding downstream 532150 58578016 ~ 58578816 (+)
G1885525 NA non-coding downstream 759478 58805344 ~ 58805580 (+)
G1883457 NA other upstream 972276 57012037 ~ 57013218 (+)
LOC110503001 LOC106611028 other upstream 1258300 56613066 ~ 56727194 (+)
G1882831 NA other upstream 1442238 56533617 ~ 56543256 (+)
G1882830 NA other upstream 1447011 56529795 ~ 56538483 (+)
G1881371 NA other upstream 2981822 55002782 ~ 55003672 (+)
G1885587 NA other downstream 816348 58862214 ~ 58864502 (+)
G1886557 NA other downstream 1678398 59724264 ~ 59736661 (+)
G1886558 NA other downstream 1681880 59727746 ~ 59736471 (+)
G1886560 NA other downstream 1703852 59749718 ~ 59786095 (+)
G1886561 NA other downstream 1738120 59783986 ~ 59787989 (+)

Expression


Co-expression Network