G1884631


Basic Information

Item Value
gene id G1884631
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 58235100 ~ 58243509 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2155930
gcagactccaaccccacagtTTCTTAACTAAGACCAACAGCTGACTCCAACTCCACAGTGtcctaactaagaccaacagcagactccaaccccacagtgtcttaactaagaccaacagcagactccaactCCACAGTATCAtaactaagaccaacagcagactccaaccccacagtgtcctaACTAAGACCATTGCCAGACTCCAACTCCACAGTGtcctaactaagaccaacagcagactccaactccacagtgtcctaactaagaccaacagcagactccaaccccacagtgtcttaactaagaccaacagcagactccaactccacagtatcctaactaagaccaacagcagactccaactccacagtgtcctaactaagaccaacagcagactccaaacccacagtgtcctaactaagaccaacagcagactccaaccccacagtaTACTAACTGAGACCAATagcagactccaaccccacagtatcctaactaagaccattgccagactccaaccccacaTatcctaactaagaccaacagcagactccaaccccacagtaTCCTAACTAAGACCATTGCCAGACTCCAACCCACAGTatcctaactaagaccaacagcaCACTCCAACTCCACAGCATCCTAACTAAGACCATTGCCAGACTCCAATCCACAGTATCCTAACTAAGACCATTGCCAGACTCCAGcccacagtgtcctaactaagaccaacagcagactccaaccccacagtgtcctaactaagaccaacagcagactccaaccccacagtatcctaactaagaccaacagcagactccaaccccacagtgtcctaACTAAGACCATTGCCAGACTCCAACCCACAGTatcctaactaagaccaacagcagactccaaccccacagtgtcctaactaagaccaacagcagaATCCAACCCCACAGTATACTAACTgagaccaacagcagactccaaccccacaATATACTAACTGAGACCAATAGCAGACTCCAACTCCACAGTTTCCTAACTAAGACCATTGCCAGAATTCAACCCCACAGTGtcctaactaagaccaacagcagactccaaccccacagtatcataactaagaccaacagcagactccaaccccacagtatcctaactaagaccaacagcagactccaaccccacagtgtcctaAGACCATTGCCAGACTCCAACCCACTGTatcctaactaagaccaacagcagactccaaccccacagtaTCCTAACTAAGACCATTGCCAGACTCCAACCCACAGTatcctaactaagaccaacagcagactccaaccccacagtgtcctaACTAAGACCATTGCCAGAATccaaccccacagtgtcctaagaccaacagcagactccaacccaCAGTATCAtaactaagaccaacagcagactacaaccccacagtatcctaactaagaccaacagcagactccaacccacagtatcctaactaagaccattgccagactccaaccccacagtgtcctaactaagaccaacagcagactccaactCCACAGTATCATAACAAacaccaacagcagactcccaccccacagtatcctaactaagaccaacagcagactccaaccccacagtgtcATAACTAAGACCATTGccagactccaaccccacagtgtcctaactaagaccaacagcagactccaaccccacagtatcctaactaaaaccaacagcagactccaaccccacagtatcctaactaagaccaacagcagactctAACCCCACAGTATCCTAAGACAATTGCCAGACTCCAACCCACAGTATCCTAACTAAGACCATTGCCAGACTCCAACCCACAGTatcctaactaagaccaacagcagactccaaccccacagtatcctaactaagaccaacagcagactccaaccccacagtgttgTAATTAAgacaaacagcagactccaaacCAACTGTATCCTAACTAAGCTAGacagcagactccaaccccacagtgtcctaaacaagaccaacagcagactccaaccccacagtatcctaactaaggccaacagcagactccaaccccacagtgttgTAATTAAgacaaacagcagactccaaacCAACTGTATCCTAACTAAGCTAGacagcagactccaaccccacagtgtcctaactaataccaacagcagactccaaccccacagtatcctaactaagaccaacagcagactccaagcCCACAGTGTCTTAGCTAAGACCAATagcagactccaaccccacagt

Function

NR:

description
PREDICTED: flocculation protein FLO11-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2155930 True 2298 lncRNA 0.48 3 58235100 58243509

Neighbor

gene id symbol gene type direction distance location
LOC110503040 LOC106579579 coding upstream 646605 57570746 ~ 57588495 (+)
LOC110503013 NA coding upstream 684304 57545275 ~ 57550796 (+)
LOC110503012 LOC106611138 coding upstream 694732 57499694 ~ 57540368 (+)
LOC118943926 NA coding upstream 835663 57379129 ~ 57399437 (+)
LOC110503004 LOC106611018 coding upstream 1391625 56829056 ~ 56843475 (+)
LOC118943835 NA coding downstream 621106 58864615 ~ 58865931 (+)
LOC110503019 LOC106611219 coding downstream 1092954 59336463 ~ 59345077 (+)
LOC118943836 NA coding downstream 1337590 59581099 ~ 59581875 (+)
LOC110503016 LOC106611257 coding downstream 1459885 59703394 ~ 59816421 (+)
LOC110503015 LOC106589751 coding downstream 1603602 59847111 ~ 59866775 (+)
G1884583 NA non-coding upstream 109405 58124895 ~ 58125695 (+)
G1884501 NA non-coding upstream 189234 57985494 ~ 58045866 (+)
G1884440 NA non-coding upstream 332713 57902140 ~ 57902387 (+)
G1884436 NA non-coding upstream 334134 57899730 ~ 57900966 (+)
G1884422 NA non-coding upstream 348294 57886493 ~ 57886806 (+)
G1884794 NA non-coding downstream 247484 58490993 ~ 58497417 (+)
G1884854 NA non-coding downstream 334507 58578016 ~ 58578816 (+)
G1885525 NA non-coding downstream 561835 58805344 ~ 58805580 (+)
G1885551 NA non-coding downstream 586493 58830002 ~ 58830958 (+)
G1885564 NA non-coding downstream 601024 58844533 ~ 58844811 (+)
G1883457 NA other upstream 1221882 57012037 ~ 57013218 (+)
LOC110503001 LOC106611028 other upstream 1507906 56613066 ~ 56727194 (+)
G1882831 NA other upstream 1691844 56533617 ~ 56543256 (+)
G1882830 NA other upstream 1696617 56529795 ~ 56538483 (+)
G1881371 NA other upstream 3231428 55002782 ~ 55003672 (+)
G1885587 NA other downstream 618705 58862214 ~ 58864502 (+)
G1886557 NA other downstream 1480755 59724264 ~ 59736661 (+)
G1886558 NA other downstream 1484237 59727746 ~ 59736471 (+)
G1886560 NA other downstream 1506209 59749718 ~ 59786095 (+)
G1886561 NA other downstream 1540477 59783986 ~ 59787989 (+)

Expression


Co-expression Network