G1885605


Basic Information

Item Value
gene id G1885605
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 58875144 ~ 58875461 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2156995
gattttgagtgaaaacctccttccatcagcaagggcattgaagatgaaacttggctgggtctttcagcatgacaatgatcccaaacacaccgcccgggcaacgaaggagtggcttcataagaagcatttcaaggtcctggagtggcctagctagtctccagatctcaaccccatagaaaatctttggagggagttgaaagtctgtgttgcccagcaacagccccaaaacatcactgctctagaggagatctgcatggcggaatgggccaaaataccagcaacagtgtgtgaaaaccttgtgaagacttacagaaaacg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2156995 True 318 lncRNA 0.48 1 58875144 58875461

Neighbor

gene id symbol gene type direction distance location
LOC118943835 NA coding upstream 9213 58864615 ~ 58865931 (+)
LOC110503040 LOC106579579 coding upstream 1286649 57570746 ~ 57588495 (+)
LOC110503013 NA coding upstream 1324348 57545275 ~ 57550796 (+)
LOC110503012 LOC106611138 coding upstream 1334776 57499694 ~ 57540368 (+)
LOC118943926 NA coding upstream 1475707 57379129 ~ 57399437 (+)
LOC110503019 LOC106611219 coding downstream 461002 59336463 ~ 59345077 (+)
LOC118943836 NA coding downstream 705638 59581099 ~ 59581875 (+)
LOC110503016 LOC106611257 coding downstream 827933 59703394 ~ 59816421 (+)
LOC110503015 LOC106589751 coding downstream 971650 59847111 ~ 59866775 (+)
LOC110503042 kcnk1 coding downstream 1086754 59962215 ~ 59972534 (+)
G1885564 NA non-coding upstream 30333 58844533 ~ 58844811 (+)
G1885551 NA non-coding upstream 44186 58830002 ~ 58830958 (+)
G1885525 NA non-coding upstream 69564 58805344 ~ 58805580 (+)
G1884854 NA non-coding upstream 296328 58578016 ~ 58578816 (+)
G1884794 NA non-coding upstream 377727 58490993 ~ 58497417 (+)
G1885607 NA non-coding downstream 60 58875521 ~ 58875844 (+)
G1885626 NA non-coding downstream 26392 58901853 ~ 58902137 (+)
G1885629 NA non-coding downstream 27646 58903107 ~ 58903355 (+)
G1885866 NA non-coding downstream 219531 59094992 ~ 59095323 (+)
G1886017 NA non-coding downstream 354261 59229722 ~ 59230186 (+)
G1885587 NA other upstream 10642 58862214 ~ 58864502 (+)
G1883457 NA other upstream 1861926 57012037 ~ 57013218 (+)
LOC110503001 LOC106611028 other upstream 2147950 56613066 ~ 56727194 (+)
G1882831 NA other upstream 2331888 56533617 ~ 56543256 (+)
G1882830 NA other upstream 2336661 56529795 ~ 56538483 (+)
G1886557 NA other downstream 848803 59724264 ~ 59736661 (+)
G1886558 NA other downstream 852285 59727746 ~ 59736471 (+)
G1886560 NA other downstream 874257 59749718 ~ 59786095 (+)
G1886561 NA other downstream 908525 59783986 ~ 59787989 (+)
slc35f3b slc35f3 other downstream 1294887 60012705 ~ 60174129 (+)

Expression


Co-expression Network