Gene
RNA
| Item | Value |
|---|---|
| gene id | G1886288 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 59333725 ~ 59334020 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: lys-63-specific deubiquitinase BRCC36-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2157739 | True | 296 | lncRNA | 0.41 | 1 | 59333725 | 59334020 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503044 | nrxn1 | coding | downstream | 566512 | 58028658 ~ 58767213 (-) |
| LOC110503041 | LOC106579580 | coding | downstream | 1717604 | 57590001 ~ 57616121 (-) |
| LOC110503011 | LOC106611131 | coding | downstream | 1900269 | 57389610 ~ 57433456 (-) |
| LOC110503010 | LOC106590975 | coding | downstream | 1952074 | 57339527 ~ 57381651 (-) |
| LOC118943925 | NA | coding | downstream | 2222860 | 57108428 ~ 57110865 (-) |
| gpr75 | gpr75 | coding | upstream | 12563 | 59346393 ~ 59351909 (-) |
| LOC110503043 | LOC106611227 | coding | upstream | 21787 | 59355807 ~ 59454278 (-) |
| LOC118943927 | NA | coding | upstream | 130151 | 59464171 ~ 59466881 (-) |
| LOC110503014 | LOC106611248 | coding | upstream | 532960 | 59866980 ~ 59948191 (-) |
| LOC118943837 | LOC106613591 | coding | upstream | 841779 | 60175799 ~ 60186033 (-) |
| G1886151 | NA | non-coding | downstream | 17238 | 59316257 ~ 59316487 (-) |
| G1886145 | NA | non-coding | downstream | 24107 | 59309131 ~ 59309618 (-) |
| G1886124 | NA | non-coding | downstream | 46388 | 59287072 ~ 59287337 (-) |
| G1886102 | NA | non-coding | downstream | 80125 | 59253095 ~ 59253600 (-) |
| G1886064 | NA | non-coding | downstream | 133988 | 59198125 ~ 59199737 (-) |
| G1886289 | NA | non-coding | upstream | 194 | 59334214 ~ 59334540 (-) |
| G1886284 | NA | non-coding | upstream | 10943 | 59344963 ~ 59345585 (-) |
| G1886283 | NA | non-coding | upstream | 11658 | 59345678 ~ 59346183 (-) |
| G1886315 | NA | non-coding | upstream | 71172 | 59405192 ~ 59406255 (-) |
| G1885863 | NA | other | downstream | 243161 | 59089673 ~ 59090564 (-) |
| G1885150 | NA | other | downstream | 1091158 | 58234219 ~ 58242567 (-) |
| G1884227 | NA | other | downstream | 1598227 | 57734357 ~ 57735498 (-) |
| LOC110503007 | LOC106586972 | other | downstream | 2217032 | 57071327 ~ 57116725 (-) |
| G1886825 | NA | other | upstream | 632342 | 59966362 ~ 59966666 (-) |
| G1886838 | NA | other | upstream | 661364 | 59995384 ~ 59997063 (-) |
| G1887449 | NA | other | upstream | 1440090 | 60774110 ~ 60825790 (-) |
| G1887761 | NA | other | upstream | 1816036 | 61150056 ~ 61151170 (-) |
