G1886436


Basic Information

Item Value
gene id G1886436
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 59590029 ~ 59590299 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2157937
AAGAGGCTTAGCACTCAGTTCAGTCATGAAGCTTATTGCAGATGGCTTTTGAGCAAAGTCAGTGAATAGCACCCTGGTGGTTTGGTAATAAGAAACCCAGACCTTAAACTATGTAGTTTGAATGCTTCTTTCTCCATGTTTAAATCTTGCCCTGCTGGTTTCACAGGTCAGAGCGAAGACATTTCCCTCCCTTCActcagtgatatactgtatatatgtagtaTAACTGAGCATGTTCTTCAGCCTGATCTTTGCGCCAGATGACTGTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2157937 True 271 lncRNA 0.42 1 59590029 59590299

Neighbor

gene id symbol gene type direction distance location
LOC118943836 NA coding upstream 8154 59581099 ~ 59581875 (+)
LOC110503019 LOC106611219 coding upstream 244952 59336463 ~ 59345077 (+)
LOC118943835 NA coding upstream 724098 58864615 ~ 58865931 (+)
LOC110503040 LOC106579579 coding upstream 2001534 57570746 ~ 57588495 (+)
LOC110503013 NA coding upstream 2039233 57545275 ~ 57550796 (+)
LOC110503016 LOC106611257 coding downstream 113095 59703394 ~ 59816421 (+)
LOC110503015 LOC106589751 coding downstream 256812 59847111 ~ 59866775 (+)
LOC110503042 kcnk1 coding downstream 371916 59962215 ~ 59972534 (+)
slc35f3b slc35f3 coding downstream 422406 60012705 ~ 60174129 (+)
col9a1b LOC106560234 coding downstream 734990 60325289 ~ 60371061 (+)
G1886435 NA non-coding upstream 123 59589645 ~ 59589906 (+)
G1886432 NA non-coding upstream 5213 59584415 ~ 59584816 (+)
G1886420 NA non-coding upstream 14289 59575506 ~ 59575740 (+)
G1886411 NA non-coding upstream 36431 59553377 ~ 59553598 (+)
G1886397 NA non-coding upstream 45650 59544036 ~ 59544379 (+)
G1886482 NA non-coding downstream 37452 59627751 ~ 59627968 (+)
G1886538 NA non-coding downstream 101956 59692255 ~ 59692478 (+)
G1886539 NA non-coding downstream 102194 59692493 ~ 59692755 (+)
G1886548 NA non-coding downstream 109549 59699848 ~ 59700061 (+)
G1886556 NA non-coding downstream 125996 59716295 ~ 59722804 (+)
G1885587 NA other upstream 725527 58862214 ~ 58864502 (+)
G1883457 NA other upstream 2576811 57012037 ~ 57013218 (+)
LOC110503001 LOC106611028 other upstream 2862835 56613066 ~ 56727194 (+)
G1882831 NA other upstream 3046773 56533617 ~ 56543256 (+)
G1882830 NA other upstream 3051546 56529795 ~ 56538483 (+)
G1886557 NA other downstream 133965 59724264 ~ 59736661 (+)
G1886558 NA other downstream 137447 59727746 ~ 59736471 (+)
G1886560 NA other downstream 159419 59749718 ~ 59786095 (+)
G1886561 NA other downstream 193687 59783986 ~ 59787989 (+)

Expression


Co-expression Network