G1886482


Basic Information

Item Value
gene id G1886482
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 59627751 ~ 59627968 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2157985
GCCCTTACACAGggtggaggtgtgttgggtcattgtcctgttgaaaaacaaatgacagtcccattaagcgcaaaccagatgggatggcgtattgctgcagaatgctgtggtagccatgctgtttaagtgtgcctaGAATTGTAAATACatgacagacagtgtcaccagcaaagcaccccaacaccatcacacctcctcctccatgctttatggtggga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2157985 True 218 lncRNA 0.49 1 59627751 59627968

Neighbor

gene id symbol gene type direction distance location
LOC118943836 NA coding upstream 45876 59581099 ~ 59581875 (+)
LOC110503019 LOC106611219 coding upstream 282674 59336463 ~ 59345077 (+)
LOC118943835 NA coding upstream 761820 58864615 ~ 58865931 (+)
LOC110503040 LOC106579579 coding upstream 2039256 57570746 ~ 57588495 (+)
LOC110503013 NA coding upstream 2076955 57545275 ~ 57550796 (+)
LOC110503016 LOC106611257 coding downstream 75426 59703394 ~ 59816421 (+)
LOC110503015 LOC106589751 coding downstream 219143 59847111 ~ 59866775 (+)
LOC110503042 kcnk1 coding downstream 334247 59962215 ~ 59972534 (+)
slc35f3b slc35f3 coding downstream 384737 60012705 ~ 60174129 (+)
col9a1b LOC106560234 coding downstream 697321 60325289 ~ 60371061 (+)
G1886436 NA non-coding upstream 37452 59590029 ~ 59590299 (+)
G1886435 NA non-coding upstream 37845 59589645 ~ 59589906 (+)
G1886432 NA non-coding upstream 42935 59584415 ~ 59584816 (+)
G1886420 NA non-coding upstream 52011 59575506 ~ 59575740 (+)
G1886411 NA non-coding upstream 74153 59553377 ~ 59553598 (+)
G1886538 NA non-coding downstream 64287 59692255 ~ 59692478 (+)
G1886539 NA non-coding downstream 64525 59692493 ~ 59692755 (+)
G1886548 NA non-coding downstream 71880 59699848 ~ 59700061 (+)
G1886556 NA non-coding downstream 88327 59716295 ~ 59722804 (+)
G1886562 NA non-coding downstream 140308 59768276 ~ 59788630 (+)
G1885587 NA other upstream 763249 58862214 ~ 58864502 (+)
G1883457 NA other upstream 2614533 57012037 ~ 57013218 (+)
LOC110503001 LOC106611028 other upstream 2900557 56613066 ~ 56727194 (+)
G1882831 NA other upstream 3084495 56533617 ~ 56543256 (+)
G1882830 NA other upstream 3089268 56529795 ~ 56538483 (+)
G1886557 NA other downstream 96296 59724264 ~ 59736661 (+)
G1886558 NA other downstream 99778 59727746 ~ 59736471 (+)
G1886560 NA other downstream 121750 59749718 ~ 59786095 (+)
G1886561 NA other downstream 156018 59783986 ~ 59787989 (+)

Expression


Co-expression Network