Gene
RNA
| Item | Value |
|---|---|
| gene id | G1886526 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 59665454 ~ 59666898 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: metal regulatory transcription factor 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2158030 | True | 296 | lncRNA | 0.51 | 2 | 59665454 | 59666898 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943927 | NA | coding | downstream | 198573 | 59464171 ~ 59466881 (-) |
| LOC110503043 | LOC106611227 | coding | downstream | 211176 | 59355807 ~ 59454278 (-) |
| gpr75 | gpr75 | coding | downstream | 313545 | 59346393 ~ 59351909 (-) |
| LOC110503044 | nrxn1 | coding | downstream | 898241 | 58028658 ~ 58767213 (-) |
| LOC110503041 | LOC106579580 | coding | downstream | 2049333 | 57590001 ~ 57616121 (-) |
| LOC110503014 | LOC106611248 | coding | upstream | 200082 | 59866980 ~ 59948191 (-) |
| LOC118943837 | LOC106613591 | coding | upstream | 508901 | 60175799 ~ 60186033 (-) |
| tarbp1 | tarbp1 | coding | upstream | 519328 | 60186226 ~ 60225168 (-) |
| LOC118936588 | LOC106613623 | coding | upstream | 565603 | 60232501 ~ 60263274 (-) |
| LOC110514479 | LOC106594326 | coding | upstream | 599668 | 60266566 ~ 60320842 (-) |
| G1886477 | NA | non-coding | downstream | 40162 | 59624973 ~ 59625292 (-) |
| G1886464 | NA | non-coding | downstream | 56487 | 59607706 ~ 59608967 (-) |
| G1886424 | NA | non-coding | downstream | 86896 | 59578334 ~ 59578558 (-) |
| G1886395 | NA | non-coding | downstream | 123010 | 59542160 ~ 59542444 (-) |
| G1886377 | NA | non-coding | downstream | 137550 | 59527644 ~ 59527904 (-) |
| G1886618 | NA | non-coding | upstream | 153352 | 59820250 ~ 59820577 (-) |
| G1886631 | NA | non-coding | upstream | 163385 | 59830283 ~ 59836800 (-) |
| G1886818 | NA | non-coding | upstream | 290937 | 59957835 ~ 59958071 (-) |
| G1886821 | kcnk1 | non-coding | upstream | 295314 | 59962212 ~ 59963003 (-) |
| G1886826 | LOC106613705 | non-coding | upstream | 301632 | 59968530 ~ 59968909 (-) |
| G1885863 | NA | other | downstream | 574890 | 59089673 ~ 59090564 (-) |
| G1885150 | NA | other | downstream | 1422887 | 58234219 ~ 58242567 (-) |
| G1884227 | NA | other | downstream | 1929956 | 57734357 ~ 57735498 (-) |
| G1886825 | NA | other | upstream | 299464 | 59966362 ~ 59966666 (-) |
| G1886838 | NA | other | upstream | 328486 | 59995384 ~ 59997063 (-) |
| G1887449 | NA | other | upstream | 1107212 | 60774110 ~ 60825790 (-) |
| G1887761 | NA | other | upstream | 1483158 | 61150056 ~ 61151170 (-) |
| LOC118943840 | NA | other | upstream | 2488330 | 62152136 ~ 62164324 (-) |
