G1886556


Basic Information

Item Value
gene id G1886556
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 59716295 ~ 59722804 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2158063
cggtgtgttggacatgatgaccaggcacagtgtcagtgtgttgaacatgaccaggctcagtgtcagtatgttggacatgaccaggctcagtgtcagtgtgttggacatgatgaccaggctcagtgtttgtgtgttgtaCATGACCAGGTTCAGTGTCAGTGTCTaagacatgatgaccaggatccgtgtcagtgtgttggacatgatgacaaggttcagtgtcagtgtgttggacatgaaaaCCAGGATCAgtatcagtgtgttggacatgatgatcagtatcagtatcagtatgTAGGGCATgatgaccaggctcagtgtcagtatgttggagatgaccaggctcagtgtcagtatttTGGTCGTGTCCAGACGAAGTTTCAGTGTGTTGTACATGACCAGGATTattgtcagtatgttggacatgaccaggctcagtgtcagtgtgttggacatgatgaccaggctcagtgtcagtatgttggac

Function

NR:

description
piezo-type mechanosensitive ion channel component 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2158063 True 487 lncRNA 0.47 3 59716295 59722804

Neighbor

gene id symbol gene type direction distance location
LOC118943836 NA coding upstream 134420 59581099 ~ 59581875 (+)
LOC110503019 LOC106611219 coding upstream 371218 59336463 ~ 59345077 (+)
LOC118943835 NA coding upstream 850364 58864615 ~ 58865931 (+)
LOC110503040 LOC106579579 coding upstream 2127800 57570746 ~ 57588495 (+)
LOC110503013 NA coding upstream 2165499 57545275 ~ 57550796 (+)
LOC110503015 LOC106589751 coding downstream 124307 59847111 ~ 59866775 (+)
LOC110503042 kcnk1 coding downstream 239411 59962215 ~ 59972534 (+)
slc35f3b slc35f3 coding downstream 289901 60012705 ~ 60174129 (+)
col9a1b LOC106560234 coding downstream 602485 60325289 ~ 60371061 (+)
LOC110516668 lmbrd1 coding downstream 923262 60646066 ~ 60907352 (+)
G1886548 NA non-coding upstream 16234 59699848 ~ 59700061 (+)
G1886539 NA non-coding upstream 23540 59692493 ~ 59692755 (+)
G1886538 NA non-coding upstream 23817 59692255 ~ 59692478 (+)
G1886482 NA non-coding upstream 88327 59627751 ~ 59627968 (+)
G1886436 NA non-coding upstream 125996 59590029 ~ 59590299 (+)
G1886562 NA non-coding downstream 45472 59768276 ~ 59788630 (+)
G1886570 NA non-coding downstream 75818 59798622 ~ 59798998 (+)
G1886615 NA non-coding downstream 94620 59817424 ~ 59817690 (+)
G1886620 NA non-coding downstream 100483 59823287 ~ 59823625 (+)
G1885587 NA other upstream 851793 58862214 ~ 58864502 (+)
G1883457 NA other upstream 2703077 57012037 ~ 57013218 (+)
LOC110503001 LOC106611028 other upstream 2989101 56613066 ~ 56727194 (+)
G1882831 NA other upstream 3173039 56533617 ~ 56543256 (+)
G1882830 NA other upstream 3177812 56529795 ~ 56538483 (+)
G1886557 NA other downstream 1460 59724264 ~ 59736661 (+)
G1886558 NA other downstream 4942 59727746 ~ 59736471 (+)
G1886560 NA other downstream 26914 59749718 ~ 59786095 (+)
G1886561 NA other downstream 61182 59783986 ~ 59787989 (+)

Expression


Co-expression Network