G1886631


Basic Information

Item Value
gene id G1886631
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 59830283 ~ 59836800 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2158152
agggaaggagaggataggtttctatataccagcaactgtcacaggcagagggaaggagaggataggtttctatataccagcaactgtcacaggcagagggaaggagaggataggtttttatataccagcaactgtcacaggcagagggaaggagaggataggtttctatataccagcaactgtcacaggcagagggaaggagaggataggtttttatataccagcaactgtcacaggcagaaggaaggagaggataggtttctatataccagcaactgtcacaggcagaaggaaggagaggataggtttctatataccagcaactgtcacaggcagtctgaaggagaggataggtttctatataccagcaactgtcacaggcagagggaaggagaggataggtttctatataccagcaactgtcacaggcagagggaaggagaggataggtttctatataccagcaactgtcacaggcagagggaaggagaggataggtttctatataccagcaactgtcacaggcagaaggaaggagaggataggtttctatataccagcaactgtcacaggcagaaggaaggagaggataggtttctatataccagcaactgtcacaggcagagggaaggagaggataggtttctatataccagcaactgtcacaggcagagggaaggagaggataggtttctatataccagcaactgtcacaggcagtctgaaggagaggataggtttctatataccagcaactgtcacaggcagacggaaggagaggataggtttctatataccagcaactgtcacaggcagagggaaggagaggataggtttctatataccagcaactgtcacaggcagacggaaggagaggataggtttctatataccagcaactgtcacaggcagagggaaggagaggataggtttctatataccagcaactgtcacaggcagagggaaggagaggataggtttctatataccagcaactgtcacaggcagaaggaaggagaggataggtttctatataccagcaactgtcacaggcagaaggaaggagaggataggtttctatataccagcaactgtcacaggcagagggaaggagaggataggtttctatataccag

Function

NR:

description
PREDICTED: AT-rich interactive domain-containing protein 1A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2158152 True 1136 lncRNA 0.47 3 59830283 59836800

Neighbor

gene id symbol gene type direction distance location
LOC118943927 NA coding downstream 363402 59464171 ~ 59466881 (-)
LOC110503043 LOC106611227 coding downstream 376005 59355807 ~ 59454278 (-)
gpr75 gpr75 coding downstream 478374 59346393 ~ 59351909 (-)
LOC110503044 nrxn1 coding downstream 1063070 58028658 ~ 58767213 (-)
LOC110503041 LOC106579580 coding downstream 2214162 57590001 ~ 57616121 (-)
LOC110503014 LOC106611248 coding upstream 30180 59866980 ~ 59948191 (-)
LOC118943837 LOC106613591 coding upstream 338999 60175799 ~ 60186033 (-)
tarbp1 tarbp1 coding upstream 349426 60186226 ~ 60225168 (-)
LOC118936588 LOC106613623 coding upstream 395701 60232501 ~ 60263274 (-)
LOC110514479 LOC106594326 coding upstream 429766 60266566 ~ 60320842 (-)
G1886618 NA non-coding downstream 9706 59820250 ~ 59820577 (-)
G1886526 NA non-coding downstream 163385 59665454 ~ 59666898 (-)
G1886477 NA non-coding downstream 204991 59624973 ~ 59625292 (-)
G1886464 NA non-coding downstream 221316 59607706 ~ 59608967 (-)
G1886424 NA non-coding downstream 251725 59578334 ~ 59578558 (-)
G1886818 NA non-coding upstream 121035 59957835 ~ 59958071 (-)
G1886821 kcnk1 non-coding upstream 125412 59962212 ~ 59963003 (-)
G1886826 LOC106613705 non-coding upstream 131730 59968530 ~ 59968909 (-)
G1886827 NA non-coding upstream 133021 59969821 ~ 59970164 (-)
G1886830 kcnk1 non-coding upstream 135112 59971912 ~ 59972553 (-)
G1885863 NA other downstream 739719 59089673 ~ 59090564 (-)
G1885150 NA other downstream 1587716 58234219 ~ 58242567 (-)
G1884227 NA other downstream 2094785 57734357 ~ 57735498 (-)
G1886825 NA other upstream 129562 59966362 ~ 59966666 (-)
G1886838 NA other upstream 158584 59995384 ~ 59997063 (-)
G1887449 NA other upstream 937310 60774110 ~ 60825790 (-)
G1887761 NA other upstream 1313256 61150056 ~ 61151170 (-)
LOC118943840 NA other upstream 2318428 62152136 ~ 62164324 (-)

Expression


Co-expression Network