G1886821 (kcnk1)


Basic Information

Item Value
gene id G1886821
gene name kcnk1
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 59962212 ~ 59963003 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2158370
GTAGACAATACAGTACTGGCGAAAAAGAGCGAGGAGGTGAAGTCCCAGTTCCAATTTGACGATGCGTTATTGAGAATGGACACTCCATAGTTACTGGCCTCGAGCGCCTTCTCCAGAAACTCCTCAAGGCGTTCTTCCGACAGACATTCGTGGTCCTGGAGGAACAGTTTTTTGATGGTTCGTAACTCCTGTCTTAGCCGGTCTTCATAAGGCAGTTCCACCGATGAAAAGACAACAGCTCCGAATATAAGATAAAGAATATATCCCAAGACTAGAAGCAAAAAATACCATGTCGATTTGTGACTTTGTATCAACCGCACACACGAATTGCTAGTTAGAGATTGTAGCATTTTCCAAGAGTTGTTGAAACCTCAATGTGTTACAGTTTATACTCTTAACATAAACAATGAATAGTTTATAGACGCCAAAATAGTAACAACGTCGGCTAAAATATCATGTAGCTTATTTCTAGTTCAAGCGCGAGGTCCTTATCAACTACGACCAAAAGCAAGCATGTGAGAATCGTTACTCTATACGTTTTGGTTTCTTTTCcgtctcctctctgcctgtcctCTGTATATTCTGTTCACTTTCACCGAGAAGGGTCGTTCTGCTGCTGAGAAGAGGATGATGTGGCGGCGGAGGATGCCGGGACTATGTTACGTCAGTCTGTTCCCCTCTTCTCTGCTCCTAGGTGAAACACATCGAAACAGACACGTGGGCGTAGAGAGCGAGTATATGGCACCTCTTTGTCTGTAGTCGTTGTTCACGAAGGTCGCATACGATCAGTGA
>TU2158373
TGAAGTCCCAGTTCCAATTTGACGATGCGTTATTGAGAATGGACACTCCATAGTTACTGGCCTCGAGCGCCTTCTCCAGAAACTCCTCAAGGCGTTCTTCCGACAGACATTCGTGGTCCTGGAGGAACAGTTTTTTGATGGTTCGTAACTCCTGTCTTAGCCGGTCTTCATAAGGCAGTTCCACCGATGAAAAGACAACAGCTCCGAATATAAGATAAAGAATATATCCCAAGACTAGAAGCAAAAAATACCATGTCGATTTGTGACTTTGTATCAACCGCACACACGAATTGCTAGTTAGAGATTGTAGCATTTTCCAAGAGTTGTTGAAACCTCAATGTGTTACAGTTTATACTCTTAACATAAACAATGAATAGTTTATAGACGCCAAAATAGTAACAACGTCGGCTAAAATATCATGTAGCTTATTTCTAGTTCAAGCGCGAGGTCCTTATCAACTACGACCAAAAGCAAGCATGTGAGAATCGTTACTCTATACGTTTTGGTTTCTTTTCcgtctcctctctgcctgtcctCTGTATATTCTGTTCACTTTCACCGAGAAGGGTCGTTCTGCTGCTGAGAAGAGGATGATGTGGCGGCGGAGGATGCCGGGACTATGTTACGTCAGTCTGTTCCCCTCTTCTCTGCTCCTAGGTGAAACACATCGAAACAGACACGTGGGCGTAGAGAGCGAGTATATGGCACCTCTTTGTCTGTAGTCGTTGTTCACGAAGGTCGCATACGATCAGTGA
>TU2158368
TGAAGTCCCAGTTCCAATTTGACGATGCGTTATTGAGAATGGACACTCCATAGTTACTGGCCTCGAGCGCCTTCTCCAGAAACTCCTCAAGGCGTTCTTCCGACAGACATTCGTGGTCCTGGAGGAACAGTTTTTTGATGGTTCGTAACTCCTGTCTTAGCCGGTCTTCATAAGGCAGTTCCACCGATGAAAAGACAACAGCTCCGAATATAAGATAAAGAATATATCCCAAGACTAGAAGCAAAAAATACCATGTCGATTTGTGACTTTGTATCAACCGCACACACGAATTGCTAGTTAGAGATTGTAGCATTTTCCAAGAGTTGTTGAAACCTCAATGTGTTACAGTTTATACTCTTAACATAAACAATGAATAGTTTATAGACGCCAAAATAGTAACAACGTCGGCTAAAATATCATGTAGCTTATTTCTAGTTCAAGCGCGAGGTCCTTATCAACTACGACCAAAAGCAAGCATGTGAGAATCGTTACTCTATACGTTTTGGTTTCTTTTCcgtctcctctctgcctgtcctCTGTATATTCTGTTCACTTTCACCGAGAAGGGTCGTTCTGCTGCTGAGAAGAGGATGATGTGGCG
>TU2158369
GTAGACAATACAGTACTGGCGAAAAAGAGCGAGGAGGTGAAGTCCCAGTTCCAATTTGACGATGCGTTATTGAGAATGGACACTCCATAGTTACTGGCCTCGAGCGCCTTCTCCAGAAACTCCTCAAGGCGTTCTTCCGACAGACATTCGTGGTCCTGGAGGAACAGTTTTTTGATGGTTCGTAACTCCTGTCTTAGCCGGTCTTCATAAGGCAGTTCCACCGATGAAAAGACAACAGCTCCGAATATAAGATAAAGAATATATCCCAAGACTAGAAGCAAAAAATACCATGTCGATTTGTGACTTTGTATCAACCGCACACACGAATTGCTAGTTAGAGATTGTAGCATTTTCCAAGAGTTGTTGAAACCTCAATGTGTTACAGTTTATACTCTTAACATAAACAATGAATAGTTTATAGACGCCAAAATAGTAACAACGTCGGCTAAAATATCATGTAGCTTATTTCTAGTTCAAGCGCGAGGTCCTTATCAACTACGACCAAAAGCAAGCATGTGAGAATCGTTACTCTATACGTTTTGGTTTCTTTTCcgtctcctctctgcctgtcctCTGTATATTCTGTTCACTTTCACCGAGAAGGGTCGTTCTGCTGCTGAGAAGAGGATGATGTGGCG

Function

symbol description
kcnk1 Enables identical protein binding activity; potassium ion leak channel activity; and sodium channel activity. Involved in potassium ion transmembrane transport; regulation of resting membrane potential; and sodium ion transmembrane transport. Located in intracellular membrane-bounded organelle. Is integral component of plasma membrane. Part of potassium channel complex.

NR:

description
potassium channel subfamily K member 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2158370 False 792 lncRNA 0.44 1 59962212 59963003
TU2158373 False 755 lncRNA 0.44 1 59962212 59962966
TU2158368 False 601 lncRNA 0.42 1 59962366 59962966
TU2158369 True 638 lncRNA 0.42 1 59962366 59963003

Neighbor

gene id symbol gene type direction distance location
LOC110503014 LOC106611248 coding downstream 14021 59866980 ~ 59948191 (-)
LOC118943927 NA coding downstream 495331 59464171 ~ 59466881 (-)
LOC110503043 LOC106611227 coding downstream 507934 59355807 ~ 59454278 (-)
gpr75 gpr75 coding downstream 610303 59346393 ~ 59351909 (-)
LOC110503044 nrxn1 coding downstream 1194999 58028658 ~ 58767213 (-)
LOC118943837 LOC106613591 coding upstream 212796 60175799 ~ 60186033 (-)
tarbp1 tarbp1 coding upstream 223223 60186226 ~ 60225168 (-)
LOC118936588 LOC106613623 coding upstream 269498 60232501 ~ 60263274 (-)
LOC110514479 LOC106594326 coding upstream 303563 60266566 ~ 60320842 (-)
LOC110515674 col19a1 coding upstream 408443 60371446 ~ 60633294 (-)
G1886818 NA non-coding downstream 4141 59957835 ~ 59958071 (-)
G1886631 NA non-coding downstream 125412 59830283 ~ 59836800 (-)
G1886618 NA non-coding downstream 141635 59820250 ~ 59820577 (-)
G1886526 NA non-coding downstream 295314 59665454 ~ 59666898 (-)
G1886477 NA non-coding downstream 336920 59624973 ~ 59625292 (-)
G1886826 LOC106613705 non-coding upstream 5527 59968530 ~ 59968909 (-)
G1886827 NA non-coding upstream 6818 59969821 ~ 59970164 (-)
G1886830 kcnk1 non-coding upstream 8909 59971912 ~ 59972553 (-)
G1886829 NA non-coding upstream 11327 59974330 ~ 59975699 (-)
G1886832 NA non-coding upstream 23540 59986543 ~ 59987104 (-)
G1885863 NA other downstream 871648 59089673 ~ 59090564 (-)
G1885150 NA other downstream 1719645 58234219 ~ 58242567 (-)
G1884227 NA other downstream 2226714 57734357 ~ 57735498 (-)
LOC110503041 LOC106579580 other downstream 2370650 57590001 ~ 57616121 (-)
G1886825 NA other upstream 3359 59966362 ~ 59966666 (-)
G1886838 NA other upstream 32381 59995384 ~ 59997063 (-)
G1887449 NA other upstream 811107 60774110 ~ 60825790 (-)
G1887761 NA other upstream 1187053 61150056 ~ 61151170 (-)
LOC118943840 NA other upstream 2192225 62152136 ~ 62164324 (-)

Expression


Co-expression Network