G1886832


Basic Information

Item Value
gene id G1886832
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 59986543 ~ 59987104 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2158384
gtcatcaAAATTGGAtctgttttcaaattctttgtggatctgtgggaaatatgtgtctctaatatggtcatacatttggcaggaggttaggaagtgcagctcagtttccacctcattttgtgggcagtgtgcacatagcctgtcttctcttgagagacaGGTCTGAATTCGATGgcatttctcaatagcaaggctatgctcactgagtctgtacatagtcaaagatttccttatttttgggtcagtcacagtggtcaggtattctgccactgtgtactctctgtttagggccaaatagcattctagtttgatcagttttttggtaaattctttccaatgtgttaagtaattatcttatTGTTTTCTcttgatttgattgggtctaattgtgttgctgtcctgggggtcTGTTGGGTCTGTTTGTGTTCGTGAACCgagctccaggaccagcttgcttgagggactcttctccaggttaatttctctgtaggtgatggctttgttgtggaaggtttgggaatagcttacttttaggtggttgtagaatttaacgtctaaTTTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2158384 True 562 lncRNA 0.41 1 59986543 59987104

Neighbor

gene id symbol gene type direction distance location
LOC110503014 LOC106611248 coding downstream 38352 59866980 ~ 59948191 (-)
LOC118943927 NA coding downstream 519662 59464171 ~ 59466881 (-)
LOC110503043 LOC106611227 coding downstream 532265 59355807 ~ 59454278 (-)
gpr75 gpr75 coding downstream 634634 59346393 ~ 59351909 (-)
LOC110503044 nrxn1 coding downstream 1219330 58028658 ~ 58767213 (-)
LOC118943837 LOC106613591 coding upstream 188695 60175799 ~ 60186033 (-)
tarbp1 tarbp1 coding upstream 199122 60186226 ~ 60225168 (-)
LOC118936588 LOC106613623 coding upstream 245397 60232501 ~ 60263274 (-)
LOC110514479 LOC106594326 coding upstream 279462 60266566 ~ 60320842 (-)
LOC110515674 col19a1 coding upstream 384342 60371446 ~ 60633294 (-)
G1886829 NA non-coding downstream 10844 59974330 ~ 59975699 (-)
G1886830 kcnk1 non-coding downstream 13990 59971912 ~ 59972553 (-)
G1886827 NA non-coding downstream 16379 59969821 ~ 59970164 (-)
G1886826 LOC106613705 non-coding downstream 17634 59968530 ~ 59968909 (-)
G1886821 kcnk1 non-coding downstream 23540 59962212 ~ 59963003 (-)
G1886836 NA non-coding upstream 3558 59990662 ~ 59990873 (-)
G1886837 NA non-coding upstream 7401 59994505 ~ 59995192 (-)
G1886839 NA non-coding upstream 10070 59997174 ~ 59997473 (-)
G1886843 NA non-coding upstream 13842 60000946 ~ 60001485 (-)
G1886881 NA non-coding upstream 94560 60081664 ~ 60081965 (-)
G1886825 NA other downstream 19877 59966362 ~ 59966666 (-)
G1885863 NA other downstream 895979 59089673 ~ 59090564 (-)
G1885150 NA other downstream 1743976 58234219 ~ 58242567 (-)
G1884227 NA other downstream 2251045 57734357 ~ 57735498 (-)
G1886838 NA other upstream 8280 59995384 ~ 59997063 (-)
G1887449 NA other upstream 787006 60774110 ~ 60825790 (-)
G1887761 NA other upstream 1162952 61150056 ~ 61151170 (-)
LOC118943840 NA other upstream 2168124 62152136 ~ 62164324 (-)
G1888836 LOC106562881 other upstream 2273733 62260837 ~ 62267505 (-)

Expression


Co-expression Network