G1886913


Basic Information

Item Value
gene id G1886913
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 60127331 ~ 60134821 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2158469
ctGAACCTCTGTCTGGGGGTCTGTCTCTCAGGGCTCTTACACAGGTGTCCGATGTAGTAGAGGGGGAAGAACAGGCAGTTCCAGGTGGTGGCGAACCAGGTGAGGGTGAATGGAGCGTCAAACTGGGTATCCAAAACAAATTACTTTAACATTTTTATTAACAGGTTTCATCTGGCACTCGCTAGCACTCAGTGGTGGATCGTGTCAatctgagtttgtgtgtgtgtgtgtttagcatgCAATTTCGTCAGGTTCTTCACCTGCTTAAAGGTGAGCTTGGCCAGCTGGGTGGACCCCGCCCACGatgagcacacacacatcaccatggCAATGCCCCACAGCGCCTTCCGCACCTGTACGGCCGTGACTTTGATGCAGCAACGAAGTCTCCACCTCCCCGTAGCAGGCTCCGCCCCCGGCGCCCCGCCGTTTGCCGCCTGGCCGTCCGCTGTGCTGCCCACCACATTCTCTCTGGGACGGTCTTCTCCTGAGCACAAAGAAAACAGTAGTAAACTATGAGACCAAAGTAGAGATTTAGAGGAGTTgtctacatcactacagtatgAGACCAGGGTAGTGATTTAGAAGAGTTGTCTATATCACTACAATATGAGACCAGGGTAGAGATTTAGAAGAGTTGTCTACAGCACTACAGTATCAGACCAGGGTAGAGATTTAGAAGAGTTGTCTACGTCACTACAATATGAGACCAGGGTAGTGATTTAGAAGAGTTGTCTACACCACTACAGTATGAGACCAGGGTAGTGATTTAGAAGAGTTGTCTACATCACTACAAAATGAGACCAGGGTAGAGATTTAGAAGAGTTgtctacatcactacagtatgAGACCAGAGTAGTGATTTAGAAGAGTTGTCTACAGCACTACAATATGAGACCAGGGTAGTGATTTAGAAGAGTTGTCTACGTCACTACAGTATGAGACCAGGGTAGTGATTTAGAAGAGTTGTCTACATCACAAGTATCGGACCAGGGTAGAGATTTAGAAGAGTTGTCTACATCACAAGTATCGGACCAGGGTAGTGATTTAGAAGAGTTGTCTACATCACAAGTATTGGACCAGGGTAGTGATTTAGAAGAGTTgtctccatcactacagtatgagaccagggtagtgatttagaagagttgtctacatcactacagtatgAGACCAGGGTAATGATTTAGAAGAGTTGTCTACAGCACTACAATATGAGACCAGAGTAGAGATTTAGAAGAGCTGTCTATAGCACTACCGCATGAGACCAGGGTAGAGATTTAGAAGAGTTGTCTACAGCACTACAATATGAGACCAGAGTAGAGATTTAGAAGAGTTgtctacatcactacagtatgAGACCAGAGTAGTGATTTAGAAGAGTTGTCTACAGCACTACAATATGAGACCAGGGTAGTGATTTAGAAGAGTTGTCTACGTCACTACAGTATGAGACCAGGGTAGTGATTTAGAAGAGTTGTCTACAGTACTACAGCATCGGACCAGGGTAGAGATTTAGAAGAGTTGTCTACATCACAAGTATCGGACCAGGGTAGTGATTTAGAAGAGTTGTCTACAGCACTACAGTATGAGACCAGGGTAGTGATTTAGAAGAGTTGTCTACATCACAAGTATCGGACCAGGGTAGAGATTTAGAAGAGTTGTCTACATCCCAAGTATCGGACCAGGGTAGTGATTTAGAAGAGTTGTCTACATCACAAGTATTGGACCAGGGTAGTGATTTAGAAGAGTTgtctccatcactacagtatgagaccagggtagtgatttagaagagttgtctacatcactacagtatgAGACCAGGGTAATGATTTAGAAGAGTTGTCTACAGCACTACAATATGAGACCAGAGTAGAGATTTAGAAGAGCTGTCTATAGCACTACCGCATGAGACCAGGGTAGAGATTTAGAAGAGTTGTCTACAGCACTACAATATGAGACCAGAGTAGAGATTTAGAAGAGTTGTCTACAGCACTACCGCATGAGACCAGGGTAGAGATTTAAAAGAGTTGTCTACAGCACTAGAATATGAGACCAGAGTAGAGATTTAGAAGAGTTGTCTACAGCACTACAATATGAGACCAGAGTAGAGATTTAGAAGAGTTGTCTACAGCACTACAATATGAGACCAGGGTAGAGATTTAGAAGAGTTGTCTACAGCACTACAATATGAGACCAGGGTAGAGATTTAGAAGAGTTGTCTACAGCACTACAATATGAGACCAGGGTAGAGATTTAGAAGAGTTGTCTACAGCACTACAATATGAGACCAGTGTGTAGAGATTTAGAAGAGTTGTCTACAGCACTACAATATGAGACCAGAGTAGAGATTTAGAAGAGTTGTCTACAGCACTACAATATGAGACCAGGGTAGAGATTTTCTGTGGAACTAGAATTATAATTAAAGGGGTCACATGGCATCAGAGACCCATAACTGCTAAATCCTACAGATGTTATAATATATTGAGATTACATTTTAAGAGACAACTCTAAAACTGTATTGCATTTTTCAATTCAATAAGCTATTATGACTCTTCTATATCCATTATCCACACCGAATATTCGATAATCTGAAGTAGCCTAAGTCACTTTCAGTAAGTACAGGTCCTTCACACAATGTCAACACGTTCTTCATACAATAACCTATTACAGCTTACAGTATCTATGCCCAAACAACACGTTTCATCCTCCACTGAATATTCCTTATGTCTATTTCAGGTCGTTTACAGTTTAACTGAACTCGGACAAAATCTATTACACAAAATCTGGTGTTCGagtgtggcagtgtgtgtgtgtgtctggcagtCATTCTGCAGCCAaacaggggacaggagacaggagagggcaggagagggcaGGGGCTGATACCCAATCTGAGACGACTTTTACTCAGGAGTCCTTGCCTCTTGActtacaatgacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagaaacacacagacagagagacacacacacatcattcatGTGTCTACCATCATTGTCTGTCTGGGACATGTCAGGACTGACTTTGTTTGACTGTGACTTTGAAGAAGTGATTAATGTTTTAGAGAAAACTTGTGTGCAGACAAACAGTAGGTACTTGAAAACACACAGAGATTATTGGACATACTGGCTCTCTTCCTAGAGCCATACAAAAATACTACAGCATCACCAACAGGACAATAGCATCACCAACAGGACAATAGCATCACCAACAGAACAATAGCATCACCAACAGGACAATAGCATCACAAACAGGGCTATAGCATCACCAACAGGACAATAGCATCACCAACAGGACAATAGCATCACCAACAGGACAATAGCATCACCAACAGAACAATAGCATCACCAACAGGACAATAGCATCACAAACAGGGCTATAGCATCACCAACAGGACAATAGCATCACCAACAGGGCAATAGCATCACCAACAGGACAATAGCATCACCAACAGGACAATAGCATCACAAACAGGGCTATAGCATCACCAACAGGACAATAGCATCACCAACAGGACAATAGCATCACCAACAGGACAATAGCATCACCAACGGGACAATAGCATCACCAACAGGACAATAGCATCACCAACAGGACAATAGCATCACCAACAGGACAATAGCATCACCAACAGGACAATAGCATCACAAACAGGACAATAGCATCACCAACAGGACAATAGCATCACAAACAGGGCTATAGCATCACCAACAGGACAATAGCATCACAAACAGGACAATAGCATCACCAACAGGACAATAGTATCACAAGCAGGGCTATAGCATCACCAACAGGACAATAGCATCACCAACAGGGCAATAGCATCACCAACAGGACAACAGCATCACCAACAGGACAATAGCATCACAAACAGGGCTCTAGCATCACCAACAGGACAATAGCATCACCAACAGGGCTATAGCATCACCAACAGGGCTCTAGCATCACCAACAGGACAATAGCATCACAAACAGGACAATAGCATCACCAACAGGACAATAGCATCACAAACAGGGCTATAGCATCACCAACAGGACAATAGCATCACCAACAGGGCTATAGCATCACCAACAGGGCTATAGCAAGCACCCagaataataacataataacaacGAATCCAAAGATAATAGAACAAGACAAGATCCCTTATGGTTCACCATGTTACGTTGTTTCATAACCATAGCTATCATCTATCTGCATGGAGCACCTGCCTTCTCCGGCTTTTTGTGTGGCTTTGTCGCCATCACATTAACATGAGGGATTTCCCTAATGGTGTTTTCACTCTAAAGATAACGacgtgtgctgtgtgtgtgtgtgtgtgtcagggtgtgtgtgtgtgtaccacaggGAAGCTAATACCTACTCATCTCCAGCCGTTAGCTACAGAATATACTCCTCCTCATGCAGTCTTGGAAACACAAGAACATTATATAACTTCTATCAAGGCAGCTTGAAACCAGGATTTACCTTCTCACTCATCACATGACCTATTGACTAATGGCAAAAGAAAAACCATTAGAAAGATACTGCAGTACTGTACCAACATTAGATACTCTAGTCATGTACTGTACATCTCTGTAACTCAATATTGAATCTGTATTCATGTGTGAAATAGCCAATTATTAAGAATGTCAGTTCAGTTTCAATAGGCCTTcgccagtggcggtcggtgctgtttaagattagggaggacaattgttttatgagcatggccctatttctattacagcatattggatgattgtcattcatattccattcacccagttcaatgtaacatggataggtttaggctactacatgatgctctaatgttccctgtacccatcacagggttgctacaacctagcctacgaaTTAAAGTGTATAATGTGCAGTAGGTGCACAGGTTGAGAGacaaattggagtaatcaaggtgacagacagtgacacattcaataacaccttgcacactcttgcctgcatctagctgatctggggTGGAATCATTAGTCAACAGTTGGCAAAtaaagagtttctattggacaaattcaggtaggtccctgtTTCGTTCCATCGGTGGAATGAAATCACCCctgatcacccacacacacagttcactttcattaatagccacatacaaacagcatctTCACTTTACACATTCCTACTGGCATCCtacctgctctcctcctctcaccttttcccttcgcttgtggacttcagtgtacaacacaacagctgtctgtgaccaggcaacaAAAAAgattccaagccaaaccttcataccataaatgtcaccatattagcttgcgtcatagtcaacatacagTAGCTACTAGAACTAGTGCGTTAGTAAACGCGCTACAATTATGCAGAACAGTgtgcagcaag

Function

NR:

description
solute carrier family 35 member F4-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2158469 True 5490 lncRNA 0.43 2 60127331 60134821

Neighbor

gene id symbol gene type direction distance location
LOC110503014 LOC106611248 coding downstream 179140 59866980 ~ 59948191 (-)
LOC118943927 NA coding downstream 660450 59464171 ~ 59466881 (-)
LOC110503043 LOC106611227 coding downstream 673053 59355807 ~ 59454278 (-)
gpr75 gpr75 coding downstream 775422 59346393 ~ 59351909 (-)
LOC110503044 nrxn1 coding downstream 1360118 58028658 ~ 58767213 (-)
LOC118943837 LOC106613591 coding upstream 40978 60175799 ~ 60186033 (-)
tarbp1 tarbp1 coding upstream 51405 60186226 ~ 60225168 (-)
LOC118936588 LOC106613623 coding upstream 97680 60232501 ~ 60263274 (-)
LOC110514479 LOC106594326 coding upstream 131745 60266566 ~ 60320842 (-)
LOC110515674 col19a1 coding upstream 236625 60371446 ~ 60633294 (-)
G1886901 NA non-coding downstream 14528 60112568 ~ 60112803 (-)
G1886894 NA non-coding downstream 24675 60102444 ~ 60102656 (-)
G1886891 NA non-coding downstream 26790 60100261 ~ 60100541 (-)
G1886881 NA non-coding downstream 45366 60081664 ~ 60081965 (-)
G1886843 NA non-coding downstream 125846 60000946 ~ 60001485 (-)
G1886916 NA non-coding upstream 5222 60140043 ~ 60140283 (-)
G1886920 NA non-coding upstream 6642 60141463 ~ 60141686 (-)
G1886923 NA non-coding upstream 15736 60150557 ~ 60151126 (-)
G1886926 NA non-coding upstream 17946 60152767 ~ 60152978 (-)
G1886928 NA non-coding upstream 21911 60156732 ~ 60156956 (-)
G1886838 NA other downstream 130268 59995384 ~ 59997063 (-)
G1886825 NA other downstream 160665 59966362 ~ 59966666 (-)
G1885863 NA other downstream 1036767 59089673 ~ 59090564 (-)
G1885150 NA other downstream 1884764 58234219 ~ 58242567 (-)
G1887449 NA other upstream 639289 60774110 ~ 60825790 (-)
G1887761 NA other upstream 1015235 61150056 ~ 61151170 (-)
LOC118943840 NA other upstream 2020407 62152136 ~ 62164324 (-)
G1888836 LOC106562881 other upstream 2126016 62260837 ~ 62267505 (-)
LOC110532867 LOC106562881 other upstream 2134801 62258118 ~ 62273944 (-)

Expression


Co-expression Network