G1887295


Basic Information

Item Value
gene id G1887295
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 60631922 ~ 60632223 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2158970
CATGTTTGTTTCCTTACCTTATATCAGTCTAATGTTCTAGTCCAGGACAGAGGGCAATCCACTCTTTGGGTTTCATTAACTTTTCTGAAATGGACACCTGTTAAGAATAAAATCGTGACGTATCATGGAGAACAATTTAAATCTAATGAAAAACATGAGCTGGCACACACCCAGAAATTttatgtagaggtgctgactaacagtgAATAAACTAGAAAAATCTACAGTGCCtcgcgaaagtattcaccctccttggcatttttcatattttgttgccttacaacctggaattaaaatagatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2158970 True 302 lncRNA 0.36 1 60631922 60632223

Neighbor

gene id symbol gene type direction distance location
col9a1b LOC106560234 coding upstream 260861 60325289 ~ 60371061 (+)
slc35f3b slc35f3 coding upstream 457793 60012705 ~ 60174129 (+)
LOC110503042 kcnk1 coding upstream 659388 59962215 ~ 59972534 (+)
LOC110503015 LOC106589751 coding upstream 765147 59847111 ~ 59866775 (+)
LOC110503016 LOC106611257 coding upstream 815501 59703394 ~ 59816421 (+)
LOC110516668 lmbrd1 coding downstream 13843 60646066 ~ 60907352 (+)
LOC118943928 LOC106577473 coding downstream 861434 61493657 ~ 61522049 (+)
LOC118943929 LOC106577282 coding downstream 908929 61541152 ~ 61555170 (+)
LOC110532895 LOC106577282 coding downstream 925788 61558011 ~ 61575674 (+)
LOC110522442 LOC106577282 coding downstream 973801 61606024 ~ 61614271 (+)
G1887291 NA non-coding upstream 2478 60629130 ~ 60629444 (+)
G1887289 NA non-coding upstream 3815 60627781 ~ 60628107 (+)
G1887108 NA non-coding upstream 85186 60546318 ~ 60546736 (+)
G1887073 NA non-coding upstream 163232 60467866 ~ 60468690 (+)
G1887014 NA non-coding upstream 322058 60308013 ~ 60309864 (+)
G1887323 NA non-coding downstream 47714 60679937 ~ 60680542 (+)
G1887353 NA non-coding downstream 125779 60758002 ~ 60775598 (+)
G1887358 NA non-coding downstream 138629 60770852 ~ 60771252 (+)
G1887359 NA non-coding downstream 140179 60772402 ~ 60773047 (+)
G1887313 NA non-coding downstream 157680 60789903 ~ 60790431 (+)
G1886561 NA other upstream 843933 59783986 ~ 59787989 (+)
G1886560 NA other upstream 845827 59749718 ~ 59786095 (+)
G1886557 NA other upstream 895261 59724264 ~ 59736661 (+)
G1887835 NA other downstream 644552 61276775 ~ 61277763 (+)
G1888298 NA other downstream 1294523 61926746 ~ 61927857 (+)
G1888544 NA other downstream 1932302 62564525 ~ 62565083 (+)

Expression


Co-expression Network