Gene
RNA
| Item | Value |
|---|---|
| gene id | G1887394 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 60648524 ~ 60649794 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2159081 | False | 212 | lncRNA | 0.41 | 2 | 60648524 | 60649115 |
| TU2159082 | True | 283 | lncRNA | 0.39 | 2 | 60648828 | 60649794 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110515674 | col19a1 | coding | downstream | 15230 | 60371446 ~ 60633294 (-) |
| LOC110514479 | LOC106594326 | coding | downstream | 327682 | 60266566 ~ 60320842 (-) |
| LOC118936588 | LOC106613623 | coding | downstream | 385250 | 60232501 ~ 60263274 (-) |
| tarbp1 | tarbp1 | coding | downstream | 423356 | 60186226 ~ 60225168 (-) |
| LOC118943837 | LOC106613591 | coding | downstream | 462492 | 60175799 ~ 60186033 (-) |
| adgrb3 | adgrb3 | coding | upstream | 289685 | 60939373 ~ 61274617 (-) |
| LOC110512348 | LOC100135993 | coding | upstream | 745899 | 61395693 ~ 61399289 (-) |
| LOC118943930 | LOC106577366 | coding | upstream | 1341294 | 61991088 ~ 62010652 (-) |
| slc1a4 | slc1a4 | coding | upstream | 1369634 | 62019428 ~ 62062283 (-) |
| LOC118943932 | NA | coding | upstream | 1385183 | 62034977 ~ 62038662 (-) |
| G1887308 | NA | non-coding | downstream | 3135 | 60644942 ~ 60645389 (-) |
| G1887305 | NA | non-coding | downstream | 7303 | 60641019 ~ 60641221 (-) |
| G1887292 | NA | non-coding | downstream | 19191 | 60629018 ~ 60629333 (-) |
| G1887200 | NA | non-coding | downstream | 277355 | 60365612 ~ 60371169 (-) |
| G1887395 | NA | non-coding | upstream | 4538 | 60654332 ~ 60655363 (-) |
| G1887444 | NA | non-coding | upstream | 108568 | 60758362 ~ 60775659 (-) |
| G1887474 | NA | non-coding | upstream | 255914 | 60905708 ~ 60906911 (-) |
| G1887506 | NA | non-coding | upstream | 258592 | 60908386 ~ 60908673 (-) |
| G1887522 | NA | non-coding | upstream | 271339 | 60921133 ~ 60921395 (-) |
| G1886838 | NA | other | downstream | 651461 | 59995384 ~ 59997063 (-) |
| G1886825 | NA | other | downstream | 681858 | 59966362 ~ 59966666 (-) |
| gpr75 | gpr75 | other | downstream | 1296654 | 59346393 ~ 59351909 (-) |
| G1885863 | NA | other | downstream | 1557960 | 59089673 ~ 59090564 (-) |
| G1885150 | NA | other | downstream | 2405957 | 58234219 ~ 58242567 (-) |
| G1887449 | NA | other | upstream | 124316 | 60774110 ~ 60825790 (-) |
| G1887761 | NA | other | upstream | 500262 | 61150056 ~ 61151170 (-) |
| LOC118943840 | NA | other | upstream | 1505434 | 62152136 ~ 62164324 (-) |
| G1888836 | LOC106562881 | other | upstream | 1611043 | 62260837 ~ 62267505 (-) |
| LOC110532867 | LOC106562881 | other | upstream | 1619828 | 62258118 ~ 62273944 (-) |
