G1887353


Basic Information

Item Value
gene id G1887353
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 60758002 ~ 60775598 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2159035
gttcaaatgttcataaatgaccagcatggtcgaataataataaggcagaatagttgaaactggagcagcagcacagtcaggtggactggggacagcaaggagtcatcatgtcaggtagtcctggggcatggtcctagggctcaggtcctccgagagagagaaagaaagagagaattagagagagcatatgtgggatggccagtcctcttctggctgtgccgggtggagattataacagaacatggccaagatgttcaaatgttcataaatgatcagcatggtcgaataataataaggcagaacagttgaaactggagcagcagcacagccaggtggactggggacagcaaggagtcatcatgtcaggtagtcctgaggcatggtcctagggctcaggtcctccgaaagagagaattagagagagcacactttaattcacacaggacaccgaataggacaggtgaagtactccagatataacaaactgaccctagcccccccgacacataaactactgcagagtaaatactggaggctgagacaggaggggtcaggagacactgtggccccatccgaggacacccccggacagggccaaacaggaaggatataaccccacccactttgccaaagcacagcccccacaccactagaggaatatcttcaaccaccaacttaccatcctgagacaaggccgagtatagcccacaaagatctccgccacggcacaacccaaaggggggcgccaacccagacaggaagatcacatcagtgactcaacccactcaagtgacgcaaccctcctagggacagcatgaaagagcaccagtaagccagtgactcagcccctgtaaaagcattagaggcagagaatcccagtggaaagaggggaaccggccaggcagagacagcaagggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2159035 True 918 lncRNA 0.52 2 60758002 60775598

Neighbor

gene id symbol gene type direction distance location
col9a1b LOC106560234 coding upstream 386941 60325289 ~ 60371061 (+)
slc35f3b slc35f3 coding upstream 583873 60012705 ~ 60174129 (+)
LOC110503042 kcnk1 coding upstream 785468 59962215 ~ 59972534 (+)
LOC110503015 LOC106589751 coding upstream 891227 59847111 ~ 59866775 (+)
LOC110503016 LOC106611257 coding upstream 941581 59703394 ~ 59816421 (+)
LOC118943928 LOC106577473 coding downstream 718059 61493657 ~ 61522049 (+)
LOC118943929 LOC106577282 coding downstream 765554 61541152 ~ 61555170 (+)
LOC110532895 LOC106577282 coding downstream 782413 61558011 ~ 61575674 (+)
LOC110522442 LOC106577282 coding downstream 830426 61606024 ~ 61614271 (+)
LOC118943838 LOC106577289 coding downstream 840384 61615982 ~ 61620197 (+)
G1887323 NA non-coding upstream 77460 60679937 ~ 60680542 (+)
G1887295 NA non-coding upstream 125779 60631922 ~ 60632223 (+)
G1887291 NA non-coding upstream 128558 60629130 ~ 60629444 (+)
G1887289 NA non-coding upstream 129895 60627781 ~ 60628107 (+)
G1887108 NA non-coding upstream 211266 60546318 ~ 60546736 (+)
G1887313 NA non-coding downstream 14305 60789903 ~ 60790431 (+)
G1887373 NA non-coding downstream 56739 60832337 ~ 60832881 (+)
G1887386 NA non-coding downstream 79642 60855240 ~ 60855699 (+)
G1887507 NA non-coding downstream 133189 60908787 ~ 60909507 (+)
G1887508 NA non-coding downstream 134218 60909816 ~ 60910401 (+)
G1886561 NA other upstream 970013 59783986 ~ 59787989 (+)
G1886560 NA other upstream 971907 59749718 ~ 59786095 (+)
G1886557 NA other upstream 1021341 59724264 ~ 59736661 (+)
G1887835 NA other downstream 501177 61276775 ~ 61277763 (+)
G1888298 NA other downstream 1151148 61926746 ~ 61927857 (+)
G1888544 NA other downstream 1788927 62564525 ~ 62565083 (+)

Expression


Co-expression Network