XLOC_037888 (dnajc3a)


Basic Information

Item Value
gene id XLOC_037888
gene name dnajc3a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 29484043 ~ 29497916 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00074384
ATCAAAGCGACCCACGACCAGTGAGCATGATGTCCGCTGGCCTGACAGATATGCGAATGCCCAGCGTGTCTTCGCCAACTTTATGTATTAAATCAGTGATTTGACGTtgggaagaaaaagaaaacatggtTGCCGTAAGCCCAGTGGCGCACAAATTGCTAAGCTACGTTCCTTTCCTGCTAGTTTTGATCGATCTTCGATATGAAGGAGTCAATGGAGGGAAGGATGGTGGCGTTGAGAATCATCTGGAGATGGGGAAGAAGCTTCTGGCTGCAGGACAGCTGGCTGATGCTCTCTCTCACTTTCACGCTGCTGTTGATGGAGAACCCAAAAATTACATGGCATTTTATAGGAGAGCAACTGTATACCTAGCCATGGGAAAGTCAAAATCTGCACTACCAGACCTCAGCAAAGTCATCGAACTTAAACCGGACTTCACGTCGGCAAGGCTTCAGAGAGGAAACCTACTGCTGAAACACGGTAAACTTGATGAAGCTGAAAGTGATTTCAAAAAAGTGCTCAAATCAAACCCAAGCAGCAGGGAAGAGCAGGAAGCACAGAGTCAGCTGAAGAAGTCTGATGAAATTCAGAGACTGGTGTCGCAGGCACAGAGTGATTTCAAACACCGAGAATATAGCTCTGCCGCATCACACCTCGACATCATCATTGATACGTGTGTTTGGGATGTGGACTCCAGAGAGATGCGGGCCGAGTGCTTCATTCAGATGGGGGAGCTGGGCAAAGCTATCAGCGACCTTAAGGCTGCTTCAAAACTGAAAAGTGACAACACTCAGGCCTTTTACAAGCTCAGTACCATCTATTATGACCTGGGAGACCATGAGATGTCCCTCAAtgaggTGAGGGAGTGTTTGAAACTGGACCAGGATCATAAGCAGTGCTTCAGCCACTACAAACAAGTGAAGAAGCTCAACAAGCAGATTCAGTCTGCTGAAGAACTTATCCAGCAGGAGAAGTACAGTGATGCAGTCAGTAAATACGAGTCTGTTATGAAGACTGAACCGAATGTTCCCCACTTCACACTGAACGCTAAAGAACGCATGTGCCACTGCTTATCAAAGGACCAGCAAACCGCCAGAGCCATTTCAGTGTGCAGTGAAGTGCTAAACACTGATCCTCAGAATGTCAATGCTCTGAAAGACCGAGCTGAAGCTTTACTGCAGGACGACCAGTATGaagaagCCATTAAAGACTTTCAGAGCGCTAAAGAGTACAGTGAAAACGACCGGCAGATCAAGGAGGGTCTGGAGCGAGCCCAGCGCCTCCTCAAACAGTCCAAGAAGAGGGATTACTACAAGATCCTGGGTGTCAAGAGAACGGCCCAGAAGAAGGAGATCTTGAAAGCCTATAGAAAGCTGGCACAGCAGTGGCATCCAGACAACTTCCAGGATGCAGAGGAGAAGAAGAAGGCAGAGAAGAAGTTTATAGACATCGCTCAAGCCAAAGAAGTCCTCACTGACCCAGAGATGAGGAGTAAGTTTGACCAGGGTGAAGATCCCATGGATCCTGAGAGTCAGCAGGGTGGAGGACATCACCACCACTTCCATGGCGGCTGGGAAAACTTCCAGGGGTTCAATCCGTTTGGTTCTGGACCTTTTAATTTCAAATTTGGTTTCAACTAAGGCTCTGCTGAAGGACCCGGGGCCTggatatatgctggagtcagcaATTGGGAACTTGAGACCCCTCACACACAGGAGCACTTCAGATGGGACAAGCGCCTTGAAGCTCGTGGTCAACTGATCTGTGAACAGCTCCTCTACTACAGGGATCTCACAGTCCTGAGTGCACGGTCAATGTGCGCATCGACCTTTACATTCCTGAGAATCACATGTACATAGAAAACAGTATTTTTCTATGAATCAAACCAagctgtaaataattaaataaagagaTATGAATGCTTATTTAAATTA
>TCONS_00074385
AAAGCGACCCACGACCAGTGAGCATGATGTCCGCTGGCCTGACAGATATGCGAATGCCCAGCGTGTCTTCGCCAACTTTATGTATTAAATCAGTGATTTGACGTtgggaagaaaaagaaaacatggtTGCCGTAAGCCCAGTGGCGCACAAATTGCTAAGCTACGTTCCTTTCCTGCTAGTTTTGATCGATCTTCGATATGAAGGAGTCAATGGAGGGAAGGATGGTGGCGTTGAGAATCATCTGGAGATGGGGAAGAAGCTTCTGGCTGCAGGACAGCTGGCTGATGCTCTCTCTCACTTTCACGCTGCTGTTGATGGAGAACCCAAAAATTACATGGCATTTTATAGGAGAGCAACTGTATACCTAGCCATGGGAAAGTCAAAATCTGCACTACCAGACCTCAGCAAAGTCATCGAACTTAAACCGGACTTCACGTCGGCAAGGCTTCAGAGAGGAAACCTACTGCTGAAACACGGTAAACTTGATGAAGCTGAAAGTGATTTCAAAAAAGTGGTGAGTAACATTAGGTTCGTAATCAGGGATGCACCAATCAGATACTTCTAGACAATTCTTAGTCTGTACTATAAATGACTTCTTACAATAATCCACACAATTTCCAGAtgtcatatattatttaaattatttaaatattaaat

Function

symbol description
dnajc3a Predicted to enable chaperone binding activity and misfolded protein binding activity. Predicted to be involved in protein folding in endoplasmic reticulum. Predicted to be active in endoplasmic reticulum. Is expressed in several structures, including axis; digestive system; hatching gland; periderm; and polster. Orthologous to human DNAJC3 (DnaJ heat shock protein family (Hsp40) member C3).

GO:

id name namespace
GO:0034975 protein folding in endoplasmic reticulum biological_process
GO:0005783 endoplasmic reticulum cellular_component
GO:0051787 misfolded protein binding molecular_function
GO:0051087 chaperone binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-1264 Predicted to enable chaperone binding activity and misfolded protein binding activity. Predicted to be involved in protein folding in endoplasmic reticulum. Predicted to be active in endoplasmic reticulum. Is expressed in several structures, including axis; digestive system; hatching gland; periderm; and polster. Orthologous to human DNAJC3 (DnaJ heat shock protein family (Hsp40) member C3).

Ensembl:

ensembl_id ENSDARG00000041110

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00074384 False 1934 mRNA 0.47 12 29484043 29497916
TCONS_00074385 True 658 processed_transcript 0.43 4 29496010 29497913

Neighbor

gene id symbol gene type direction distance location
XLOC_037887 hs6st3b coding downstream 56467 29338986 ~ 29427576 (-)
XLOC_037886 pth2ra coding downstream 162378 29122039 ~ 29321665 (-)
XLOC_037885 NA coding downstream 390684 29075291 ~ 29093359 (-)
XLOC_037884 FP103048.1 coding downstream 418625 29064147 ~ 29065418 (-)
XLOC_037883 NA coding downstream 425237 29057437 ~ 29058806 (-)
XLOC_037889 NA coding upstream 8504 29506420 ~ 29509975 (-)
XLOC_037890 arhgap20 coding upstream 31485 29529401 ~ 29544720 (-)
XLOC_037891 cenpj coding upstream 71459 29569375 ~ 29579908 (-)
XLOC_037892 spryd7b coding upstream 138704 29636620 ~ 29643628 (-)
XLOC_037893 NA coding upstream 154125 29652041 ~ 29662625 (-)
XLOC_037877 NA non-coding downstream 863689 28618252 ~ 28620354 (-)
XLOC_037875 NA non-coding downstream 886752 28596496 ~ 28597291 (-)
XLOC_037894 NA non-coding upstream 184281 29682197 ~ 29707257 (-)
XLOC_037896 CR749776.1 non-coding upstream 310031 29807947 ~ 29808064 (-)
XLOC_037898 BX322575.1 non-coding upstream 607004 30104920 ~ 30107960 (-)

Expression


Co-expression Network