G1887358


Basic Information

Item Value
gene id G1887358
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 60770852 ~ 60771252 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2159042
caaattcttatttacaatgccgtcctacaccggccaaacccggacgactctgggccaattgtgcgccgccctatgggactcccaatcacagccggttgtgatacggcctggaatcaaaccagggtctgtagtgacgcctcagaccgctgagatgcagtgccttagaccgctgagatgcagtgcagaccgctgagatgcagtgccttagaccgctgagatgcagtgccttagaccgctgagatgcagggccttagaccgctgagatgcagggccttagaccgctgagatgcagtgccttagaccgctgagatgcagtgccttagaccgctgagatgcagtgccttagaccgctgagatgcagtgccttagaccgct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2159042 True 375 lncRNA 0.57 2 60770852 60771252

Neighbor

gene id symbol gene type direction distance location
col9a1b LOC106560234 coding upstream 399791 60325289 ~ 60371061 (+)
slc35f3b slc35f3 coding upstream 596723 60012705 ~ 60174129 (+)
LOC110503042 kcnk1 coding upstream 798318 59962215 ~ 59972534 (+)
LOC110503015 LOC106589751 coding upstream 904077 59847111 ~ 59866775 (+)
LOC110503016 LOC106611257 coding upstream 954431 59703394 ~ 59816421 (+)
LOC118943928 LOC106577473 coding downstream 722405 61493657 ~ 61522049 (+)
LOC118943929 LOC106577282 coding downstream 769900 61541152 ~ 61555170 (+)
LOC110532895 LOC106577282 coding downstream 786759 61558011 ~ 61575674 (+)
LOC110522442 LOC106577282 coding downstream 834772 61606024 ~ 61614271 (+)
LOC118943838 LOC106577289 coding downstream 844730 61615982 ~ 61620197 (+)
G1887323 NA non-coding upstream 90310 60679937 ~ 60680542 (+)
G1887295 NA non-coding upstream 138629 60631922 ~ 60632223 (+)
G1887291 NA non-coding upstream 141408 60629130 ~ 60629444 (+)
G1887289 NA non-coding upstream 142745 60627781 ~ 60628107 (+)
G1887108 NA non-coding upstream 224116 60546318 ~ 60546736 (+)
G1887359 NA non-coding downstream 1150 60772402 ~ 60773047 (+)
G1887313 NA non-coding downstream 18651 60789903 ~ 60790431 (+)
G1887373 NA non-coding downstream 61085 60832337 ~ 60832881 (+)
G1887386 NA non-coding downstream 83988 60855240 ~ 60855699 (+)
G1887507 NA non-coding downstream 137535 60908787 ~ 60909507 (+)
G1886561 NA other upstream 982863 59783986 ~ 59787989 (+)
G1886560 NA other upstream 984757 59749718 ~ 59786095 (+)
G1886557 NA other upstream 1034191 59724264 ~ 59736661 (+)
G1887835 NA other downstream 505523 61276775 ~ 61277763 (+)
G1888298 NA other downstream 1155494 61926746 ~ 61927857 (+)
G1888544 NA other downstream 1793273 62564525 ~ 62565083 (+)

Expression


Co-expression Network