Gene
RNA
| Item | Value |
|---|---|
| gene id | G1887690 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 60938367 ~ 60938728 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2159434 | True | 362 | lncRNA | 0.38 | 1 | 60938367 | 60938728 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110515674 | col19a1 | coding | downstream | 305073 | 60371446 ~ 60633294 (-) |
| LOC110514479 | LOC106594326 | coding | downstream | 617525 | 60266566 ~ 60320842 (-) |
| LOC118936588 | LOC106613623 | coding | downstream | 675093 | 60232501 ~ 60263274 (-) |
| tarbp1 | tarbp1 | coding | downstream | 713199 | 60186226 ~ 60225168 (-) |
| LOC118943837 | LOC106613591 | coding | downstream | 752335 | 60175799 ~ 60186033 (-) |
| adgrb3 | adgrb3 | coding | upstream | 751 | 60939373 ~ 61274617 (-) |
| LOC110512348 | LOC100135993 | coding | upstream | 456965 | 61395693 ~ 61399289 (-) |
| LOC118943930 | LOC106577366 | coding | upstream | 1052360 | 61991088 ~ 62010652 (-) |
| slc1a4 | slc1a4 | coding | upstream | 1080700 | 62019428 ~ 62062283 (-) |
| LOC118943932 | NA | coding | upstream | 1096249 | 62034977 ~ 62038662 (-) |
| G1887686 | NA | non-coding | downstream | 7087 | 60931052 ~ 60931280 (-) |
| G1887522 | NA | non-coding | downstream | 16972 | 60921133 ~ 60921395 (-) |
| G1887506 | NA | non-coding | downstream | 29694 | 60908386 ~ 60908673 (-) |
| G1887474 | NA | non-coding | downstream | 31456 | 60905708 ~ 60906911 (-) |
| G1887444 | NA | non-coding | downstream | 162708 | 60758362 ~ 60775659 (-) |
| G1887693 | NA | non-coding | upstream | 17086 | 60955814 ~ 60956243 (-) |
| G1887696 | NA | non-coding | upstream | 20944 | 60959672 ~ 60960384 (-) |
| G1887706 | NA | non-coding | upstream | 54713 | 60993441 ~ 60994045 (-) |
| G1887709 | NA | non-coding | upstream | 64241 | 61002969 ~ 61003783 (-) |
| G1887449 | NA | other | downstream | 112577 | 60774110 ~ 60825790 (-) |
| G1886838 | NA | other | downstream | 941304 | 59995384 ~ 59997063 (-) |
| G1886825 | NA | other | downstream | 971701 | 59966362 ~ 59966666 (-) |
| gpr75 | gpr75 | other | downstream | 1586497 | 59346393 ~ 59351909 (-) |
| G1885863 | NA | other | downstream | 1847803 | 59089673 ~ 59090564 (-) |
| G1887761 | NA | other | upstream | 211328 | 61150056 ~ 61151170 (-) |
| LOC118943840 | NA | other | upstream | 1216500 | 62152136 ~ 62164324 (-) |
| G1888836 | LOC106562881 | other | upstream | 1322109 | 62260837 ~ 62267505 (-) |
| LOC110532867 | LOC106562881 | other | upstream | 1330894 | 62258118 ~ 62273944 (-) |
