Gene
RNA
| Item | Value |
|---|---|
| gene id | G1887720 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 61027110 ~ 61029364 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2159477 | False | 270 | lncRNA | 0.37 | 3 | 61027110 | 61029364 |
| TU2159478 | True | 607 | lncRNA | 0.39 | 3 | 61027110 | 61028470 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110515674 | col19a1 | coding | downstream | 393816 | 60371446 ~ 60633294 (-) |
| LOC110514479 | LOC106594326 | coding | downstream | 706268 | 60266566 ~ 60320842 (-) |
| LOC118936588 | LOC106613623 | coding | downstream | 763836 | 60232501 ~ 60263274 (-) |
| tarbp1 | tarbp1 | coding | downstream | 801942 | 60186226 ~ 60225168 (-) |
| LOC118943837 | LOC106613591 | coding | downstream | 841078 | 60175799 ~ 60186033 (-) |
| LOC110512348 | LOC100135993 | coding | upstream | 366329 | 61395693 ~ 61399289 (-) |
| LOC118943930 | LOC106577366 | coding | upstream | 961724 | 61991088 ~ 62010652 (-) |
| slc1a4 | slc1a4 | coding | upstream | 990064 | 62019428 ~ 62062283 (-) |
| LOC118943932 | NA | coding | upstream | 1005613 | 62034977 ~ 62038662 (-) |
| LOC118943934 | LOC106592896 | coding | upstream | 1090566 | 62119930 ~ 62147728 (-) |
| G1887718 | NA | non-coding | downstream | 2355 | 61024263 ~ 61024755 (-) |
| G1887711 | NA | non-coding | downstream | 21404 | 61004934 ~ 61005706 (-) |
| G1887709 | NA | non-coding | downstream | 23327 | 61002969 ~ 61003783 (-) |
| G1887706 | NA | non-coding | downstream | 33065 | 60993441 ~ 60994045 (-) |
| G1887696 | NA | non-coding | downstream | 66726 | 60959672 ~ 60960384 (-) |
| G1887744 | NA | non-coding | upstream | 51257 | 61080621 ~ 61081681 (-) |
| G1887746 | NA | non-coding | upstream | 60891 | 61090255 ~ 61091609 (-) |
| G1887752 | NA | non-coding | upstream | 88893 | 61118257 ~ 61118671 (-) |
| G1887774 | NA | non-coding | upstream | 150006 | 61179370 ~ 61180019 (-) |
| G1887808 | NA | non-coding | upstream | 192565 | 61221929 ~ 61222691 (-) |
| G1887449 | NA | other | downstream | 201320 | 60774110 ~ 60825790 (-) |
| G1886838 | NA | other | downstream | 1030047 | 59995384 ~ 59997063 (-) |
| G1886825 | NA | other | downstream | 1060444 | 59966362 ~ 59966666 (-) |
| gpr75 | gpr75 | other | downstream | 1675240 | 59346393 ~ 59351909 (-) |
| G1885863 | NA | other | downstream | 1936546 | 59089673 ~ 59090564 (-) |
| G1887761 | NA | other | upstream | 120692 | 61150056 ~ 61151170 (-) |
| LOC118943840 | NA | other | upstream | 1125864 | 62152136 ~ 62164324 (-) |
| G1888836 | LOC106562881 | other | upstream | 1231473 | 62260837 ~ 62267505 (-) |
| LOC110532867 | LOC106562881 | other | upstream | 1240258 | 62258118 ~ 62273944 (-) |
