G1887761


Basic Information

Item Value
gene id G1887761
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 61150056 ~ 61151170 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2159535
ATCCTCTCTACTCCAGACAATATGACCCCAAACACCCTCACTACTCCAGACAATATGACCCCAAACATCCTCACTACTCCAGACAATATAACCCCAAACATTGTCACTACTCCAGACAATATGACCGCAAACATCCTTACTACTCCAGACAATATGACCCCAAACATTGTCACTACTCCAGACAATATGACCCCAAACATCCTCACTACTCCAGACAATATGACCCCAAACATCCTCACTACTCCAGACAATATGACCCCAAACATCCTCACTACTCCAGACAATATAACCCCAAACATCCTCACTACTCCAGACAATATGACCCCAAACATCCTCACTACTCCAGACAATATAACCCCAAACATCCTCACAGACGATGGTGTATGTAT
>TU2159536
ATCCTCTCTACTCCAGACAATATGACCCCAAACACCCTCACTACTCCAGACAATATGACCCCAAACATCCTCACTACTCCAGACAATATAACCCCAAACATTGTCACTACTCCAGACAATATAACCCCAAACATCCTCACTACTCCAGACAATATGACCCCAAACATCCTTACTACTCCAGACAATATGCCCCCAAACATCCTCACTACTCCAGACAATATAACCCCAAACATCCTCACTACTCCAGACAATATGACCCCAAACATCCTCACTACTCCAGACAATATAACCCCAAACATCCTCACAGACGATGGTGTATGTAT
>TU2159537
ATCCTCTCTACTCCAGACAATATGACCCCAAACACCCTCACTACTCCAGACAATATGACCCCAAACATCCTCACTACTCCAGACAATATAACCCCAAACATTGTCACTACTCCAGACAATATGACCCCAAACATTGTCACTACTCCAGACAATATGACCCCAAACATCCTCACTACTCCAGACAATATGACCCCAAACATCCTCACTACTCCAGACAATATGACCCCAAACATTGTCACTACTCCAGACAATATGACCCCAAACATCCTTACTACTCCAGACAATATGACCCCAAACATCCTCACTACTCCAGACAATATAACCCCAAACATCCTCACTACTCCAGACAATATGACCCCAAACATCCTCACTACTCCAGACAATATAACCCCAAACATCCTCACAGACGATGGTGTATGTAT
>TU2159538
ATCCTCTCTACTCCAGACAATATGACCCCAAACACCCTCACTACTCCAGACAATATGACCCCAAACATCCTCACTACTCCAGACAATATAACCCCAAACATTGTCACTACTCCAGACAATATAACCCCAAACATCCTCACTACTCCAGACAATATGACCCCAAACATCCTTACTACTCCAGACAATATGCCCCCAAACATCCTCACTACTCCAGACAATATAACCCCAAACATCCTCTCTACTCCAGACAATATGACCCCAAACATCCTTACTACTCCAGACAATATGACCCCAAACATCCTTACTACTCCAGAC

Function

NR:

description
microtubule-associated protein 6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2159535 False 389 TUCP 0.44 3 61150056 61151170
TU2159536 False 323 TUCP 0.44 3 61150056 61151170
TU2159537 False 422 TUCP 0.44 3 61150056 61151170
TU2159538 True 315 TUCP 0.44 2 61150526 61151170

Neighbor

gene id symbol gene type direction distance location
LOC110515674 col19a1 coding downstream 516762 60371446 ~ 60633294 (-)
LOC110514479 LOC106594326 coding downstream 829214 60266566 ~ 60320842 (-)
LOC118936588 LOC106613623 coding downstream 886782 60232501 ~ 60263274 (-)
tarbp1 tarbp1 coding downstream 924888 60186226 ~ 60225168 (-)
LOC118943837 LOC106613591 coding downstream 964024 60175799 ~ 60186033 (-)
LOC110512348 LOC100135993 coding upstream 244523 61395693 ~ 61399289 (-)
LOC118943930 LOC106577366 coding upstream 839918 61991088 ~ 62010652 (-)
slc1a4 slc1a4 coding upstream 868258 62019428 ~ 62062283 (-)
LOC118943932 NA coding upstream 883807 62034977 ~ 62038662 (-)
LOC118943934 LOC106592896 coding upstream 968760 62119930 ~ 62147728 (-)
G1887752 NA non-coding downstream 31385 61118257 ~ 61118671 (-)
G1887746 NA non-coding downstream 58447 61090255 ~ 61091609 (-)
G1887744 NA non-coding downstream 68375 61080621 ~ 61081681 (-)
adgrb3 adgrb3 non-coding downstream 116386 60939373 ~ 61274617 (-)
G1887720 NA non-coding downstream 120692 61027110 ~ 61029364 (-)
G1887774 NA non-coding upstream 28200 61179370 ~ 61180019 (-)
G1887808 NA non-coding upstream 70759 61221929 ~ 61222691 (-)
G1887826 NA non-coding upstream 112419 61263589 ~ 61265121 (-)
G1887827 NA non-coding upstream 116378 61267548 ~ 61268023 (-)
G1887833 NA non-coding upstream 123873 61275043 ~ 61275408 (-)
G1887449 NA other downstream 324266 60774110 ~ 60825790 (-)
G1886838 NA other downstream 1152993 59995384 ~ 59997063 (-)
G1886825 NA other downstream 1183390 59966362 ~ 59966666 (-)
gpr75 gpr75 other downstream 1798186 59346393 ~ 59351909 (-)
G1885863 NA other downstream 2059492 59089673 ~ 59090564 (-)
LOC118943840 NA other upstream 1004058 62152136 ~ 62164324 (-)
G1888836 LOC106562881 other upstream 1109667 62260837 ~ 62267505 (-)
LOC110532867 LOC106562881 other upstream 1118452 62258118 ~ 62273944 (-)

Expression


Co-expression Network