G1887917


Basic Information

Item Value
gene id G1887917
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 61343509 ~ 61349531 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2159716
aatggcacacatacacaattcatgtctgaAATGTCTCAAGGCTTCATCCTCCTttaacccatctcctctccttcatctatactgattgaagtggatttaacaagtaacatcaataatAGATCATatttttcacctggattcacctgaccgtctatgtcatggaaagagcaggtgtccctaatgttttgtccactcagtgaaCAGTGGTGTTAACCTCGGTGTACAGTGTAGTGGTGTTAACCTCGGTGTCCTGTGTACAGTGGTGTTAACCTCGGTGTCCTGTGTACAGCGGTGTAAAGCTCAGTATACTGTGTAAAGTGGTGTTAACCTCAGTGTAcagtggtgttaacctcagtatactgtgtaaagtggtgttaacctcagtatactgtgtagtggtgttaacctcagtatactgtgtacagtgacagtggtgttaacctcagtatactgtgtaaagtggtgttaacctcagtgtacagtggtgttaacctcagtgtcctgtgtacagtggtgttaacctcagtatactgtgtaaagtggtgttaacctcagtgacagtggtgttaacctcagtATACTGTGTACAGTGGTGTTAACCTCGGTGTCCTGTGTAcagtggtgttaacctcagtatactgtgtacagtggtgttaacctcagtatactgtgtacagtggtgttaacctcagtatactgtgtaaagtggtgttaacctcagtatactgtgtaaagtggtgttaacctcagtatactgtgtacagtggtgttaacctcagtATACTGTGTAAAGTGGTGTTAACCTCAGTATACTGTGTACAGTGACAGTGGTGttaacctcagtATACTGTGTAAAGTGGTGTTAACCTCAGTATACTGTGTACAGTGAC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2159716 True 890 lncRNA 0.42 2 61343509 61349531

Neighbor

gene id symbol gene type direction distance location
adgrb3 adgrb3 coding downstream 68892 60939373 ~ 61274617 (-)
LOC110515674 col19a1 coding downstream 710215 60371446 ~ 60633294 (-)
LOC110514479 LOC106594326 coding downstream 1022667 60266566 ~ 60320842 (-)
LOC118936588 LOC106613623 coding downstream 1080235 60232501 ~ 60263274 (-)
tarbp1 tarbp1 coding downstream 1118341 60186226 ~ 60225168 (-)
LOC110512348 LOC100135993 coding upstream 46162 61395693 ~ 61399289 (-)
LOC118943930 LOC106577366 coding upstream 641557 61991088 ~ 62010652 (-)
slc1a4 slc1a4 coding upstream 669897 62019428 ~ 62062283 (-)
LOC118943932 NA coding upstream 685446 62034977 ~ 62038662 (-)
LOC118943934 LOC106592896 coding upstream 770399 62119930 ~ 62147728 (-)
G1887852 NA non-coding downstream 55528 61287740 ~ 61287981 (-)
G1887839 NA non-coding downstream 64418 61278723 ~ 61279091 (-)
G1887833 NA non-coding downstream 68101 61275043 ~ 61275408 (-)
G1887827 NA non-coding downstream 75486 61267548 ~ 61268023 (-)
G1887826 NA non-coding downstream 78388 61263589 ~ 61265121 (-)
G1887926 NA non-coding upstream 14769 61364300 ~ 61364515 (-)
G1887929 NA non-coding upstream 16278 61365809 ~ 61366065 (-)
G1887980 NA non-coding upstream 74135 61423666 ~ 61424290 (-)
G1887984 NA non-coding upstream 76953 61426484 ~ 61426720 (-)
G1888056 NA non-coding upstream 163343 61512874 ~ 61513163 (-)
G1887761 NA other downstream 192339 61150056 ~ 61151170 (-)
G1887449 NA other downstream 517719 60774110 ~ 60825790 (-)
G1886838 NA other downstream 1346446 59995384 ~ 59997063 (-)
G1886825 NA other downstream 1376843 59966362 ~ 59966666 (-)
gpr75 gpr75 other downstream 1991639 59346393 ~ 59351909 (-)
LOC118943840 NA other upstream 805697 62152136 ~ 62164324 (-)
G1888836 LOC106562881 other upstream 911306 62260837 ~ 62267505 (-)
LOC110532867 LOC106562881 other upstream 920091 62258118 ~ 62273944 (-)

Expression


Co-expression Network