G1887969


Basic Information

Item Value
gene id G1887969
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 61418060 ~ 61418334 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2159782
ACTTTATACTGGTTACAACCATTTACAACTACTTGGTTGTTAAATAGTTTGCTTAATTTGGTTATTTTGCCATCTAGTCATTGAACGAACACATcatcagctaacgttagctacaagGAAGAAAGTGGTTGTATCTATCAGTCAAGCATACCCGTTCAGCAGAAACAATGCCATTTCGGCAGCTCGTCTAAGATGGAGTTGACTCCGGAGCTCCCGCCACCTTTCTTCTTCTTTGAGGTTTATTGGCAGACTACATTAGGTGTAGTCACCTACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2159782 True 275 lncRNA 0.41 1 61418060 61418334

Neighbor

gene id symbol gene type direction distance location
LOC110516668 lmbrd1 coding upstream 510708 60646066 ~ 60907352 (+)
col9a1b LOC106560234 coding upstream 1046999 60325289 ~ 60371061 (+)
slc35f3b slc35f3 coding upstream 1243931 60012705 ~ 60174129 (+)
LOC110503042 kcnk1 coding upstream 1445526 59962215 ~ 59972534 (+)
LOC110503015 LOC106589751 coding upstream 1551285 59847111 ~ 59866775 (+)
LOC118943928 LOC106577473 coding downstream 75323 61493657 ~ 61522049 (+)
LOC118943929 LOC106577282 coding downstream 122818 61541152 ~ 61555170 (+)
LOC110532895 LOC106577282 coding downstream 139677 61558011 ~ 61575674 (+)
LOC110522442 LOC106577282 coding downstream 187690 61606024 ~ 61614271 (+)
LOC118943838 LOC106577289 coding downstream 197648 61615982 ~ 61620197 (+)
G1887968 NA non-coding upstream 149 61417632 ~ 61417911 (+)
G1887928 NA non-coding upstream 52330 61365432 ~ 61365730 (+)
G1887923 NA non-coding upstream 56449 61361142 ~ 61361611 (+)
G1887899 NA non-coding upstream 80099 61337132 ~ 61337961 (+)
G1887883 NA non-coding upstream 100514 61313472 ~ 61317546 (+)
G1887976 NA non-coding downstream 4071 61422405 ~ 61422957 (+)
G1887979 NA non-coding downstream 5443 61423777 ~ 61424338 (+)
G1887983 NA non-coding downstream 8233 61426567 ~ 61426796 (+)
G1887985 NA non-coding downstream 9957 61428291 ~ 61428492 (+)
G1888060 NA non-coding downstream 99005 61517339 ~ 61517574 (+)
G1887835 NA other upstream 140297 61276775 ~ 61277763 (+)
G1886561 NA other upstream 1630071 59783986 ~ 59787989 (+)
G1886560 NA other upstream 1631965 59749718 ~ 59786095 (+)
G1886558 NA other upstream 1681589 59727746 ~ 59736471 (+)
G1888298 NA other downstream 508412 61926746 ~ 61927857 (+)
G1888544 NA other downstream 1146191 62564525 ~ 62565083 (+)

Expression


Co-expression Network